RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 KIAA2012Q0VF49 1180 aa11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 TM4SF20Q53R12 229 aa11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 KIAA0907Q7Z7F0 614 aaPredicted RBP11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 LRRTM3Q86VH5 581 aa11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 DLG3Q92796 817 aa11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 LCORQ96JN0 433 aaPredicted RBP11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 KRTAP9-9Q9BYP9 154 aa11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 KRTAP9-4Q9BYQ2 154 aa11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 CD109Q6YHK3 1445 aa11.69□□□□□ -0.54
NIFKP4-201ENST00000567275 MROH6A6NGR9 719 aa11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 TRAF5O00463 557 aa11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 FRMD5Q7Z6J6 570 aa11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 HIPK4Q8NE63 616 aa11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 INCENPQ9NQS7 918 aa11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 KCND1Q9NSA2 647 aa11.68□□□□□ -0.54
NIFKP4-201ENST00000567275 PHLDB1Q86UU1 1377 aa11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 C9orf118A6NHY6 69 aa11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 KPNA6O60684 536 aa11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 ZBTB48P10074 688 aaPredicted RBP11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 DPP8Q6V1X1 898 aaPredicted RBP11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 MFSD3Q96ES6 412 aa11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 GBP4Q96PP9 640 aa11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
NIFKP4-201ENST00000567275 H7C1D1 291 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 CBX4O00257 560 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 IL18BPO95998 194 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 COL6A1P12109 1028 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 SDHAP31040 664 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 MC4RP32245 332 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 CTSWP56202 376 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 ASB15Q8WXK1 588 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 ADAM7Q9H2U9 754 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 UCKL1Q9NWZ5 548 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 GALNT8Q9NY28 637 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 BTBD7Q9P203 1132 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 B4GALT6Q9UBX8 382 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 ZKSCAN5Q9Y2L8 839 aa11.66□□□□□ -0.54
NIFKP4-201ENST00000567275 H0Y858 1186 aa11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 KNG1P01042 644 aa11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 KIF11P52732 1056 aa11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 PLEKHG4Q58EX7 1191 aa11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 BORAQ6PGQ7 559 aa11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 WDR48Q8TAF3 677 aa11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 DDX1Q92499 740 aaKnown RBP11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 PCIF1Q9H4Z3 704 aa11.65□□□□□ -0.54
NIFKP4-201ENST00000567275 A0A0G2JLL6 359 aaPredicted RBP11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 ZNF174Q15697 407 aa11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 SDE2Q6IQ49 451 aa11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 ERCC4Q92889 916 aaPredicted RBP11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 BARX1Q9HBU1 254 aaPredicted RBP11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 ASB1Q9Y576 335 aa11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 ARAP3Q8WWN8 1544 aa11.64□□□□□ -0.55
NIFKP4-201ENST00000567275 PRAMEF22A3QJZ6 481 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 NFIXQ14938 502 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 PPM1KQ8N3J5 372 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 NUDT10Q8NFP7 164 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 NUDT11Q96G61 164 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 TEPSINQ96N21 525 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
NIFKP4-201ENST00000567275 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 POU3F2P20265 443 aaPredicted RBP11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 CATSPEREQ5SY80 951 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 UBXN11Q5T124 520 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 LGI4Q8N135 537 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 AHI1Q8N157 1196 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 KLHL36Q8N4N3 616 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 SLKQ9H2G2 1235 aaPredicted RBP11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 ACSS2Q9NR19 701 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 IFT57Q9NWB7 429 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 ZDHHC9Q9Y397 364 aa11.62□□□□□ -0.55
NIFKP4-201ENST00000567275 GAS7O60861 476 aa11.61□□□□□ -0.55
NIFKP4-201ENST00000567275 KLHL18O94889 574 aa11.61□□□□□ -0.55
NIFKP4-201ENST00000567275 CNR2P34972 360 aa11.61□□□□□ -0.55
NIFKP4-201ENST00000567275 NFATC3Q12968 1075 aa11.61□□□□□ -0.55
NIFKP4-201ENST00000567275 LILRA6Q6PI73 481 aa11.61□□□□□ -0.55
NIFKP4-201ENST00000567275 FERMT3Q86UX7 667 aa11.61□□□□□ -0.55
NIFKP4-201ENST00000567275 KIAA1958Q8N8K9 716 aa11.61□□□□□ -0.55
NIFKP4-201ENST00000567275 HSD3B2P26439 372 aa11.6□□□□□ -0.55
NIFKP4-201ENST00000567275 ECE1P42892 770 aa11.6□□□□□ -0.55
NIFKP4-201ENST00000567275 GYS2P54840 703 aa11.6□□□□□ -0.55
NIFKP4-201ENST00000567275 KIF18BQ86Y91 864 aa11.6□□□□□ -0.55
NIFKP4-201ENST00000567275 ORAI3Q9BRQ5 295 aa11.6□□□□□ -0.55
NIFKP4-201ENST00000567275 BTBD2Q9BX70 525 aa11.6□□□□□ -0.55
NIFKP4-201ENST00000567275 ATP10BO94823 1461 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 CLSTN1O94985 981 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 MPIG6BO95866 241 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 IL13RA1P78552 427 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 CALML6Q8TD86 181 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 AMNQ9BXJ7 453 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 MTFR1LQ9H019 292 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 DUSP10Q9Y6W6 482 aa11.59□□□□□ -0.55
NIFKP4-201ENST00000567275 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
NIFKP4-201ENST00000567275 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms