RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.27■■□□□ 1.48
NME3-210ENST00000567271 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.27■■□□□ 1.48
NME3-210ENST00000567271 DDX11L8A8MPP1 907 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 RBAK-RBAKDNI3L0D1 243 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 SLITRK3O94933 977 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 TCTN1Q2MV58 587 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 IER5Q5VY09 327 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 ANO5Q75V66 913 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 HSD17B14Q9BPX1 270 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 EIF2AK1Q9BQI3 630 aaKnown RBP24.27■■□□□ 1.48
NME3-210ENST00000567271 LXNQ9BS40 222 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.27■■□□□ 1.48
NME3-210ENST00000567271 SEPT9Q9UHD8 586 aaPredicted RBP24.27■■□□□ 1.48
NME3-210ENST00000567271 CDY2AQ9Y6F7 541 aa24.27■■□□□ 1.48
NME3-210ENST00000567271 TMEM150BA6NC51 233 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 ZBBXA8MT70 800 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 BAIAP3O94812 1187 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 SYT1P21579 422 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 TECP42680 631 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 SMAD3P84022 425 aaKnown RBP24.26■■□□□ 1.47
NME3-210ENST00000567271 PTGDRQ13258 359 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 CTTNQ14247 550 aaKnown RBP24.26■■□□□ 1.47
NME3-210ENST00000567271 PLEKHG4Q58EX7 1191 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 C4orf19Q8IY42 314 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 CEP89Q96ST8 783 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 ZSWIM4Q9H7M6 989 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 SLC4A7Q9Y6M7 1214 aa24.26■■□□□ 1.47
NME3-210ENST00000567271 VPS37CA5D8V6 355 aaPredicted RBP24.25■■□□□ 1.47
NME3-210ENST00000567271 POTEMA6NI47 508 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 CYP4A11Q02928 519 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 TMEM62Q0P6H9 643 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 MTERF2Q49AM1 385 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 FAM109BQ6ICB4 259 aaPredicted RBP24.25■■□□□ 1.47
NME3-210ENST00000567271 METTL13Q8N6R0 699 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 LINC01465Q8N7H1 131 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 DBF4BQ8NFT6 615 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 TRPV2Q9Y5S1 764 aa24.25■■□□□ 1.47
NME3-210ENST00000567271 TBC1D8BQ0IIM8 1120 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 FBXO47Q5MNV8 452 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 EFCAB12Q6NXP0 572 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 BRAPQ7Z569 592 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 TPH2Q8IWU9 490 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 NEK9Q8TD19 979 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 SEPT8Q92599 483 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 SH2D3AQ9BRG2 576 aa24.24■■□□□ 1.47
NME3-210ENST00000567271 CELF4Q9BZC1 486 aaKnown RBP24.24■■□□□ 1.47
NME3-210ENST00000567271 ABHD14A-ACY1A0A1B0GW23 586 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 M0QZ92 97 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 LAD1O00515 517 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 LYPLA2O95372 231 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 FXR2P51116 673 aaKnown RBP eCLIP24.23■■□□□ 1.47
NME3-210ENST00000567271 IKBKEQ14164 716 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 LPIN1Q14693 890 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 PLA2G4FQ68DD2 849 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 GPR153Q6NV75 609 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 CYP26B1Q9NR63 512 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 KDM3AQ9Y4C1 1321 aa24.23■■□□□ 1.47
NME3-210ENST00000567271 EVPLQ92817 2033 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 GRXCR1A8MXD5 290 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 GHRP10912 638 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 TMOD1P28289 359 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 YWHABP31946 246 aaKnown RBP24.22■■□□□ 1.47
NME3-210ENST00000567271 CLCN3P51790 818 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 NPEPPSP55786 919 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 TMEM266Q2M3C6 531 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 OTUD6AQ7L8S5 288 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 FERMT3Q86UX7 667 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 LRRC71Q8N4P6 559 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 SUGCTQ9HAC7 445 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 SQORQ9Y6N5 450 aa24.22■■□□□ 1.47
NME3-210ENST00000567271 IGKV6-21A0A0C4DH24 114 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 ZBTB39O15060 712 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 EFCAB14O75071 495 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 MAFO75444 373 aaPredicted RBP24.21■■□□□ 1.47
NME3-210ENST00000567271 SPATA31C1P0DKV0 1188 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 ATP2A2P16615 1042 aaKnown RBP24.21■■□□□ 1.47
NME3-210ENST00000567271 PRPHP41219 470 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 WDR5P61964 334 aaKnown RBP24.21■■□□□ 1.47
NME3-210ENST00000567271 PDIA5Q14554 519 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 ZNF579Q8NAF0 562 aaKnown RBP24.21■■□□□ 1.47
NME3-210ENST00000567271 PHOSPHO2Q8TCD6 241 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 APBB2Q92870 758 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 CEP170P1Q96L14 293 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 IFIH1Q9BYX4 1025 aaKnown RBP24.21■■□□□ 1.47
NME3-210ENST00000567271 MTMR6Q9Y217 621 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 PPME1Q9Y570 386 aa24.21■■□□□ 1.47
NME3-210ENST00000567271 SIP14410 1827 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 VTNP04004 478 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 KCNJ6P48051 423 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 ATP2C1P98194 919 aaPredicted RBP24.2■■□□□ 1.46
NME3-210ENST00000567271 MKRN4PQ13434 485 aaPredicted RBP24.2■■□□□ 1.46
NME3-210ENST00000567271 TSHZ1Q6ZSZ6 1077 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 CATSPER3Q86XQ3 398 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 USP38Q8NB14 1042 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 ERMNQ8TAM6 284 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 MAP7D2Q96T17 732 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 SLC9A7Q96T83 725 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 POLR3CQ9BUI4 534 aaPredicted RBP24.2■■□□□ 1.46
NME3-210ENST00000567271 CDHR5Q9HBB8 845 aa24.2■■□□□ 1.46
NME3-210ENST00000567271 TUFT1Q9NNX1 390 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms