RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CEP83Q9Y592 693 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 EYA4O95677 639 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 KLRC1P26715 233 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 SPP2Q13103 211 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 NNTQ13423 1086 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 GNPTABQ3T906 1256 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 GJB7Q6PEY0 223 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 ZNF653Q96CK0 615 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 FUT8Q9BYC5 575 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 C1orf112Q9NSG2 853 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 ZNF446Q9NWS9 450 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.4
CDH1-210ENST00000566612 INPP5BP32019 993 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 BAG6P46379 1132 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 NPY5RQ15761 445 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 MTERF2Q49AM1 385 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 LIN9Q5TKA1 542 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 CIAPIN1Q6FI81 312 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 CERS5Q8N5B7 392 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 MGARPQ8TDB4 240 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 NT5C1BQ96P26 610 aa12.58□□□□□ -0.4
CDH1-210ENST00000566612 MSH4O15457 936 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 KLRC4O43908 158 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 RPA1P27694 616 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
CDH1-210ENST00000566612 SNX1Q13596 522 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 SLC18A3Q16572 532 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 DENND2CQ68D51 928 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 TMEM139Q8IV31 216 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 TMEM206Q9H813 350 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 DAAM1Q9Y4D1 1078 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 A0A087X0T9 212 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 FAM228BP0C875 321 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 TTC31Q49AM3 519 aaPredicted RBP12.57□□□□□ -0.4
CDH1-210ENST00000566612 SEPT14Q6ZU15 432 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
CDH1-210ENST00000566612 AZI2Q9H6S1 392 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
CDH1-210ENST00000566612 PDXKO00764 312 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 HIP1RO75146 1068 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 APOBEC3HQ6NTF7 200 aaKnown RBP12.57□□□□□ -0.4
CDH1-210ENST00000566612 RNF207Q6ZRF8 634 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 B4GALNT4Q76KP1 1039 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 AMIGO3Q86WK7 504 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 RTKN2Q8IZC4 609 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 C4orf32Q8N8J7 132 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 SAAL1Q96ER3 474 aa12.57□□□□□ -0.4
CDH1-210ENST00000566612 CASP4P49662 377 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 LIG3P49916 1009 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 MFAP3P55082 362 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 DCAF15Q66K64 600 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 FAM163AQ96GL9 167 aaPredicted RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 PBKQ96KB5 322 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 CABS1Q96KC9 395 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 RBM12Q9NTZ6 932 aaKnown RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 IFNB1P01574 187 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 PTK2Q05397 1052 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 MTMR3Q13615 1198 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 SHROOM1Q2M3G4 852 aaPredicted RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 C10orf76Q5T2E6 689 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 RSRC2Q7L4I2 434 aaKnown RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 FRMD5Q7Z6J6 570 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 TAB3Q8N5C8 712 aaPredicted RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 SSU72P8A0A1W2PR75 194 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 PDCLQ13371 301 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 BEND6Q5SZJ8 279 aaPredicted RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 EMBQ6PCB8 327 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 IRF2BP1Q8IU81 584 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 XXYLT1Q8NBI6 393 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 AGBL1Q96MI9 1066 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 ZDHHC15Q96MV8 337 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 RUSC1Q9BVN2 902 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 RGS16O15492 202 aaPredicted RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 CCNI2Q6ZMN8 369 aaPredicted RBP12.56□□□□□ -0.4
CDH1-210ENST00000566612 TRAPPC11Q7Z392 1133 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 METTL13Q8N6R0 699 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 SCFD1Q8WVM8 642 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 SHISA4Q96DD7 197 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 ANKZF1Q9H8Y5 726 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 AGTPBP1Q9UPW5 1226 aa12.56□□□□□ -0.4
CDH1-210ENST00000566612 SASH3O75995 380 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 HOXA7P31268 230 aaPredicted RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 PRAMEF18Q5VWM3 479 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 KAZNQ674X7 775 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 CAPN12Q6ZSI9 719 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 NCAPG2Q86XI2 1143 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 STMN4Q9H169 189 aaPredicted RBP12.55□□□□□ -0.4
CDH1-210ENST00000566612 ZNF408Q9H9D4 720 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 FEM1BQ9UK73 627 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
CDH1-210ENST00000566612 A0A1W2PQJ5 194 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms