RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PDXKO00764 312 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 PPP1R37O75864 691 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 PRPF4BQ13523 1007 aaKnown RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 EPHA7Q15375 998 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 CERKLQ49MI3 558 aaPredicted RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 NAA35Q5VZE5 725 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 FBXW10Q5XX13 1052 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 ZC3H3Q8IXZ2 948 aaKnown RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 LRRC57Q8N9N7 239 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 LMBR1Q8WVP7 490 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.53■□□□□ 0.08
CDH1-209ENST00000566510 RUSC1Q9BVN2 902 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 TRIM31Q9BZY9 425 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 SEPT11Q9NVA2 429 aaKnown RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 CYP3A7-CYP3A51PA0A087WV96 503 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 HMGB1P1B2RPK0 211 aaPredicted RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 H0YHG0 523 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 DAPK3O43293 454 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 ABCB4P21439 1286 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 CYP3A7P24462 503 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 HSPA9P38646 679 aaKnown RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 RNF187Q5TA31 235 aaPredicted RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 ADAT2Q7Z6V5 191 aaKnown RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 ACTRT1Q8TDG2 376 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 SCFD2Q8WU76 684 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 AMNQ9BXJ7 453 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
CDH1-209ENST00000566510 ATAD5Q96QE3 1844 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 ASTN1O14525 1302 aa15.53■□□□□ 0.08
CDH1-209ENST00000566510 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 BTNL10A8MVZ5 291 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 CHMP2AO43633 222 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 MDH1P40925 334 aaKnown RBP15.52■□□□□ 0.08
CDH1-209ENST00000566510 CUL1Q13616 776 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 DPY19L2P1Q6NXN4 242 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 KSR1Q8IVT5 923 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 CD302Q8IX05 232 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 MYCT1Q8N699 235 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 SLC35C1Q96A29 364 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 NEUROG2Q9H2A3 272 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 DPH5Q9H2P9 285 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 METTL14Q9HCE5 456 aaKnown RBP15.52■□□□□ 0.08
CDH1-209ENST00000566510 RABGAP1Q9Y3P9 1069 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
CDH1-209ENST00000566510 AP3B2Q13367 1082 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 ICE2Q659A1 982 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 FBXO11Q86XK2 927 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 PLCD3Q8N3E9 789 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 LRRC45Q96CN5 670 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 CCDC17Q96LX7 622 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.07
CDH1-209ENST00000566510 DNAJC18Q9H819 358 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 OSGEPQ9NPF4 335 aa15.52■□□□□ 0.07
CDH1-209ENST00000566510 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDH1-209ENST00000566510 CES2O00748 559 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 MSH4O15457 936 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 TTI1O43156 1089 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 GDF11O95390 407 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 FLT3P36888 993 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 GTF2A1P52655 376 aaPredicted RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 ITGB3BPQ13352 177 aaPredicted RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 CTTNQ14247 550 aaKnown RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 PTGISQ16647 500 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 ZC2HC1CQ53FD0 456 aaPredicted RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 EPM2AIP1Q7L775 607 aaPredicted RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 TPH2Q8IWU9 490 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 KAT2BQ92831 832 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 CCT8L2Q96SF2 557 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 TMBIM4Q9HC24 238 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 FBXL5Q9UKA1 691 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 CAPN7Q9Y6W3 813 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 FAM13AO94988 1023 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 ECHS1P30084 290 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 NMT1P30419 496 aaKnown RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 STAT1P42224 750 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 GALCP54803 685 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 ICA1Q05084 483 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 KIAA0825Q8IV33 1275 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 ZNF473Q8WTR7 871 aaKnown RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 EIF2AK1Q9BQI3 630 aaKnown RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 SIX2Q9NPC8 291 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 F5H6K3 240 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 PPP1R12BO60237 982 aaPredicted RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 EVI5O60447 810 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 CPP00450 1065 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 PRKCIP41743 596 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 HDLBPQ00341 1268 aaKnown RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 KLRC3Q07444 240 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 SF3B2Q13435 895 aaKnown RBP15.51■□□□□ 0.07
CDH1-209ENST00000566510 NLRP14Q86W24 1093 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 SYCE1Q8N0S2 351 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 CCDC26Q8TAB7 109 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 DCAF4Q8WV16 495 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 LENG9Q96B70 501 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 CRAMP1Q96RY5 1269 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 USP21Q9UK80 565 aa15.51■□□□□ 0.07
CDH1-209ENST00000566510 MYO3BQ8WXR4 1341 aa15.5■□□□□ 0.07
CDH1-209ENST00000566510 DDTLA6NHG4 134 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms