RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 Q9UFV3 132 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 CDC42EP3Q9UKI2 254 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 FAM184BQ9ULE4 1060 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 TCRBV5S4A2TA0A5A2 114 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 PRAMEF25A6NGN4 478 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 APPP05067 770 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 ERCC5P28715 1186 aaPredicted RBP3.84□□□□□ -1.79
SMG1-212ENST00000566328 ECE1P42892 770 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 ARID5AQ03989 594 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 CRY1Q16526 586 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 C16orf59Q7L2K0 433 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 MAMDC2Q7Z304 686 aaPredicted RBP3.84□□□□□ -1.79
SMG1-212ENST00000566328 MTDHQ86UE4 582 aaKnown RBP3.84□□□□□ -1.79
SMG1-212ENST00000566328 GPR135Q8IZ08 494 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 OR14K1Q8NGZ2 314 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 LPPQ93052 612 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 AGAP2Q99490 1192 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 OR10A5Q9H207 317 aa3.84□□□□□ -1.79
SMG1-212ENST00000566328 BLACEA4D250 179 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 MAN2B1O00754 1011 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 KRT15P19012 456 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 CD83Q01151 205 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 HGFACQ04756 655 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 MAP3K12Q12852 859 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 MOGSQ13724 837 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 RRP1BQ14684 758 aaKnown RBP3.83□□□□□ -1.8
SMG1-212ENST00000566328 FAM47CQ5HY64 1035 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 TMEM200BQ69YZ2 307 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 GRAMD4Q6IC98 578 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 OSTM1Q86WC4 334 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 PTRH1Q86Y79 214 aaKnown RBP3.83□□□□□ -1.8
SMG1-212ENST00000566328 SCUBE1Q8IWY4 988 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 PTPRN2Q92932 1015 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 ZNF669Q96BR6 464 aaPredicted RBP3.83□□□□□ -1.8
SMG1-212ENST00000566328 TMEM176AQ96HP8 235 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 IPO9Q96P70 1041 aaKnown RBP3.83□□□□□ -1.8
SMG1-212ENST00000566328 TTPALQ9BTX7 342 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 SLC2A4RGQ9NR83 387 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 BTBD7Q9P203 1132 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 KIAA1522Q9P206 1035 aaPredicted RBP3.83□□□□□ -1.8
SMG1-212ENST00000566328 VWA7Q9Y334 891 aa3.83□□□□□ -1.8
SMG1-212ENST00000566328 ASXL2Q76L83 1435 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 A0A1W2PRX2 142 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 FOXN1O15353 648 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 CLASP2O75122 1294 aaKnown RBP3.82□□□□□ -1.8
SMG1-212ENST00000566328 C4BPAP04003 597 aaKnown RBP3.82□□□□□ -1.8
SMG1-212ENST00000566328 AMY2AP04746 511 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 FGRP09769 529 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 AMY2BP19961 511 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 PTGS2P35354 604 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 SESN2P58004 480 aaPredicted RBP3.82□□□□□ -1.8
SMG1-212ENST00000566328 GUCY1A3Q02108 690 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 CNGB1Q14028 1251 aaPredicted RBP3.82□□□□□ -1.8
SMG1-212ENST00000566328 KANK2Q63ZY3 851 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 LAIR1Q6GTX8 287 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 ANKS3Q6ZW76 656 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 ZNF627Q7L945 461 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 GSPT2Q8IYD1 628 aaKnown RBP3.82□□□□□ -1.8
SMG1-212ENST00000566328 CELF2-AS1Q8N7Q2 184 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 HNRNPLLQ8WVV9 542 aaKnown RBP3.82□□□□□ -1.8
SMG1-212ENST00000566328 RABGGTAQ92696 567 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 MIEF2Q96C03 454 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 UCKL1Q9NWZ5 548 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 TRAF6Q9Y4K3 522 aa3.82□□□□□ -1.8
SMG1-212ENST00000566328 RHOBTB3O94955 611 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 PYGMP11217 842 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 ZC3H6P61129 1189 aaKnown RBP3.81□□□□□ -1.8
SMG1-212ENST00000566328 RIN1Q13671 783 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 SPTY2D1Q68D10 685 aaPredicted RBP3.81□□□□□ -1.8
SMG1-212ENST00000566328 PCSK4Q6UW60 755 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 PCDH19Q8TAB3 1148 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 CALML6Q8TD86 181 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 CDC6Q99741 560 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 AMNQ9BXJ7 453 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 PCDHA8Q9Y5H6 950 aa3.81□□□□□ -1.8
SMG1-212ENST00000566328 ZNF561-AS1K7EIQ3 104 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 ARVCFO00192 962 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 H2AFYO75367 372 aaKnown RBP3.8□□□□□ -1.8
SMG1-212ENST00000566328 MAFO75444 373 aaPredicted RBP3.8□□□□□ -1.8
SMG1-212ENST00000566328 BMP5P22003 454 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 APEX1P27695 318 aaKnown RBP3.8□□□□□ -1.8
SMG1-212ENST00000566328 MC4RP32245 332 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 MAN2A2P49641 1150 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 JAM2P57087 298 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 LACTBP83111 547 aaPredicted RBP3.8□□□□□ -1.8
SMG1-212ENST00000566328 YOD1Q5VVQ6 348 aaPredicted RBP3.8□□□□□ -1.8
SMG1-212ENST00000566328 MCF2L2Q86YR7 1114 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 HIPK4Q8NE63 616 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 HAS1Q92839 578 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 VOPP1Q96AW1 172 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 AGO3Q9H9G7 860 aaKnown RBP3.8□□□□□ -1.8
SMG1-212ENST00000566328 CBLCQ9ULV8 474 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 TNFRSF18Q9Y5U5 241 aa3.8□□□□□ -1.8
SMG1-212ENST00000566328 CCDC66A2RUB6 948 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 TRAF5O00463 557 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 PPFIA4O75335 1185 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 MPIG6BO95866 241 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 SRGAP2CP0DJJ0 459 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 KRT4P19013 534 aa3.79□□□□□ -1.8
SMG1-212ENST00000566328 STAT5BP51692 787 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms