RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 FGF18O76093 207 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 STAT5BP51692 787 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 VCPP55072 806 aaKnown RBP14.6□□□□□ -0.07
RNF40-208ENST00000565995 PLCB3Q01970 1234 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 TMEM62Q0P6H9 643 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 ODR4Q5SWX8 454 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 SLC24A5Q71RS6 500 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 TMTC2Q8N394 836 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 RUFY2Q8WXA3 655 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 MAP4K1Q92918 833 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 RPGRIP1Q96KN7 1286 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 MXRA8Q9BRK3 442 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 CWH43Q9H720 699 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 ELAC1Q9H777 363 aaKnown RBP14.6□□□□□ -0.07
RNF40-208ENST00000565995 PCDHA6Q9UN73 950 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 PCDHA8Q9Y5H6 950 aa14.6□□□□□ -0.07
RNF40-208ENST00000565995 MTCL1Q9Y4B5 1905 aaKnown RBP14.6□□□□□ -0.07
RNF40-208ENST00000565995 SPDYE3A6NKU9 549 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 PER2O15055 1255 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 CSPG5O95196 566 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 GSPT1P15170 499 aaKnown RBP14.59□□□□□ -0.07
RNF40-208ENST00000565995 HOXB8P17481 243 aaPredicted RBP14.59□□□□□ -0.07
RNF40-208ENST00000565995 CHMLP26374 656 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 ACTR2P61160 394 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 RBM10P98175 930 aaKnown RBP14.59□□□□□ -0.07
RNF40-208ENST00000565995 FAM102BQ5T8I3 360 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 TTC22Q5TAA0 569 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 ANKRD54Q6NXT1 300 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 KIAA0319LQ8IZA0 1049 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 COLGALT1Q8NBJ5 622 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 MICAL1Q8TDZ2 1067 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 TRAPPC12Q8WVT3 735 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 RIPOR3Q96MK2 946 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 TRPC6Q9Y210 931 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 NOC2LQ9Y3T9 749 aaKnown RBP14.59□□□□□ -0.07
RNF40-208ENST00000565995 COL1A2P08123 1366 aa14.59□□□□□ -0.07
RNF40-208ENST00000565995 FANCMQ8IYD8 2048 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 GFRA3O60609 400 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 PPFIA3O75145 1194 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 RPS6KA5O75582 802 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 PLEKHA8P1O95397 391 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 CALM1P0DP23 149 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 CALM2P0DP24 149 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 CALM3P0DP25 149 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 KLRC1P26715 233 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 LIFRP42702 1097 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 SYCE2Q6PIF2 218 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 EXOC6Q8TAG9 804 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 ADAM2Q99965 735 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 MYL10Q9BUA6 226 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 CDHR5Q9HBB8 845 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 TYW1Q9NV66 732 aaKnown RBP14.58□□□□□ -0.08
RNF40-208ENST00000565995 TMEM161AQ9NX61 479 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 TMEM260Q9NX78 707 aa14.58□□□□□ -0.08
RNF40-208ENST00000565995 TBKBP1A7MCY6 615 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 MEIS1O00470 390 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 GPR182O15218 404 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 SGSM2O43147 1006 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 HBP1O60381 514 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 FOXK2Q01167 660 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 NFX1Q12986 1120 aaKnown RBP14.57□□□□□ -0.08
RNF40-208ENST00000565995 DSC3Q14574 896 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 UBE2SQ16763 222 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 TMEM266Q2M3C6 531 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 ABHD15Q6UXT9 468 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 CYP2W1Q8TAV3 490 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 TMEM40Q8WWA1 233 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 MRPS27Q92552 414 aaKnown RBP14.57□□□□□ -0.08
RNF40-208ENST00000565995 TMEM87BQ96K49 555 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 SDF4Q9BRK5 362 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 NGRNQ9NPE2 291 aaKnown RBP14.57□□□□□ -0.08
RNF40-208ENST00000565995 PKD2L1Q9P0L9 805 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 ST3GAL5Q9UNP4 418 aa14.57□□□□□ -0.08
RNF40-208ENST00000565995 ZBTB42B2RXF5 422 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
RNF40-208ENST00000565995 FOSP01100 380 aaPredicted RBP14.56□□□□□ -0.08
RNF40-208ENST00000565995 ARP10275 920 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 LAG3P18627 525 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 PDE4AP27815 886 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 CRYBB1P53674 252 aaPredicted RBP14.56□□□□□ -0.08
RNF40-208ENST00000565995 ITGB3BPQ13352 177 aaPredicted RBP14.56□□□□□ -0.08
RNF40-208ENST00000565995 CEP55Q53EZ4 464 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 ZNF484Q5JVG2 852 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 UBALD2Q8IYN6 164 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 THNSL1Q8IYQ7 743 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 CMTR1Q8N1G2 835 aaKnown RBP14.56□□□□□ -0.08
RNF40-208ENST00000565995 ATOH1Q92858 354 aaPredicted RBP14.56□□□□□ -0.08
RNF40-208ENST00000565995 AGO4Q9HCK5 861 aaKnown RBP14.56□□□□□ -0.08
RNF40-208ENST00000565995 NR2E1Q9Y466 385 aa14.56□□□□□ -0.08
RNF40-208ENST00000565995 DENND3A2RUS2 1198 aa14.55□□□□□ -0.08
RNF40-208ENST00000565995 SH2B2O14492 632 aaPredicted RBP14.55□□□□□ -0.08
RNF40-208ENST00000565995 MCM5P33992 734 aa14.55□□□□□ -0.08
RNF40-208ENST00000565995 TECP42680 631 aa14.55□□□□□ -0.08
RNF40-208ENST00000565995 SPOUT1Q5T280 376 aaKnown RBP14.55□□□□□ -0.08
RNF40-208ENST00000565995 CASC1Q6TDU7 716 aa14.55□□□□□ -0.08
RNF40-208ENST00000565995 LRRC55Q6ZSA7 311 aa14.55□□□□□ -0.08
RNF40-208ENST00000565995 NIPA1Q7RTP0 329 aa14.55□□□□□ -0.08
RNF40-208ENST00000565995 FANCBQ8NB91 859 aa14.55□□□□□ -0.08
RNF40-208ENST00000565995 CASD1Q96PB1 797 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms