RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MARCH8Q5T0T0 291 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 OTUD6AQ7L8S5 288 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 ANKRD33Q7Z3H0 272 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 GPT2Q8TD30 523 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 TOX2Q96NM4 488 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 HDAC6Q9UBN7 1215 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 GTF2IRD1Q9UHL9 959 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 DBR1Q9UK59 544 aaKnown RBP14.1□□□□□ -0.15
SF3B3-206ENST00000565990 KIAA1024Q9UPX6 916 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 HPSEQ9Y251 543 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 PPME1Q9Y570 386 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 NRCAMQ92823 1304 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 COL1A2P08123 1366 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 ARID2Q68CP9 1835 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 MBLAC1A4D2B0 266 aaPredicted RBP14.09□□□□□ -0.15
SF3B3-206ENST00000565990 RRN3P2A6NIE6 340 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 INSRRP14616 1297 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 MARK3P27448 753 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 YWHABP31946 246 aaKnown RBP14.09□□□□□ -0.15
SF3B3-206ENST00000565990 PRKCEQ02156 737 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 VTI1AQ96AJ9 217 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 CTAGE1Q96RT6 745 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 PDLIM7Q9NR12 457 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 DDX19AQ9NUU7 478 aaKnown RBP14.09□□□□□ -0.15
SF3B3-206ENST00000565990 KDM3AQ9Y4C1 1321 aa14.09□□□□□ -0.15
SF3B3-206ENST00000565990 IGKV6-21A0A0C4DH24 114 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 CD4P01730 458 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 RARRES1P49788 294 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
SF3B3-206ENST00000565990 NAALADL2Q58DX5 795 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 POTEGQ6S5H5 508 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 KCNK18Q7Z418 384 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 CKAP2LQ8IYA6 745 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 C7orf31Q8N865 590 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 CALML4Q96GE6 196 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 BLOC1S4Q9NUP1 217 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 SETD4Q9NVD3 440 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 CCDC39Q9UFE4 941 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 DNM3Q9UQ16 869 aa14.08□□□□□ -0.16
SF3B3-206ENST00000565990 A0A087WWV3 80 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 A0A087X0B3 334 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 E9PMD0 336 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 EYA4O95677 639 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 GNAT1P11488 350 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 KLRC1P26715 233 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 NPEPPSP55786 919 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 GRIK4Q16099 956 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 E2F4Q16254 413 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 GDF6Q6KF10 455 aaPredicted RBP14.07□□□□□ -0.16
SF3B3-206ENST00000565990 MTHFD1LQ6UB35 978 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 CCDC73Q6ZRK6 1079 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 FAM126BQ8IXS8 530 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 PIGOQ8TEQ8 1089 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 LRRC15Q8TF66 581 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 FAM13BQ9NYF5 915 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 KCNH3Q9ULD8 1083 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 ALPK3Q96L96 1907 aa14.07□□□□□ -0.16
SF3B3-206ENST00000565990 C17orf102A2RUQ5 167 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 TMEM150BA6NC51 233 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 MAGEB2O15479 319 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 MAFO75444 373 aaPredicted RBP14.06□□□□□ -0.16
SF3B3-206ENST00000565990 TPM2P07951 284 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 MSNP26038 577 aaKnown RBP14.06□□□□□ -0.16
SF3B3-206ENST00000565990 TXLNAP40222 546 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 SOX10P56693 466 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 PPFIA1Q13136 1202 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 EXOC8Q8IYI6 725 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 SYT2Q8N9I0 419 aaPredicted RBP14.06□□□□□ -0.16
SF3B3-206ENST00000565990 ENGASEQ8NFI3 743 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 CEP170P1Q96L14 293 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 PLIN2Q99541 437 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 DHX33Q9H6R0 707 aaKnown RBP14.06□□□□□ -0.16
SF3B3-206ENST00000565990 TMEM63CQ9P1W3 806 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 STK17AQ9UEE5 414 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 MROH7Q68CQ1 1323 aa14.06□□□□□ -0.16
SF3B3-206ENST00000565990 A0A1B0GVL5 298 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 TREHO43280 583 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 ZNF500O60304 480 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 GADD45BO75293 160 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 C22orf31O95567 290 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 PFKFB1P16118 471 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 PLCG1P19174 1290 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 RFC5P40937 340 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 RGS19P49795 217 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 SLC12A3P55017 1021 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 CHMP4BP1P59074 171 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 UBE2HP62256 183 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 ZNF200P98182 395 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 LRRC26Q2I0M4 334 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 XKR9Q5GH70 373 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 CCDC183Q5T5S1 534 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 PLA2G4FQ68DD2 849 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms