RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 NLRP10Q86W26 655 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 FAF2Q96CS3 445 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 PAGE5Q96GU1 130 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 SRP68Q9UHB9 627 aaKnown RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 ABCC3O15438 1527 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 ZNF667Q5HYK9 610 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 RNF168Q8IYW5 571 aaPredicted RBP14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 VPS39Q96JC1 886 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 NDST4Q9H3R1 872 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 NFKBIAP25963 317 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 ARHGDIAP52565 204 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 E2F5Q15329 346 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 CENPUQ71F23 418 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 THEM5Q8N1Q8 247 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 FBXO41Q8TF61 875 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 RECQLP46063 649 aaPredicted RBP14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 NNTQ13423 1086 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 KRT80Q6KB66 452 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 PIP4K2CQ8TBX8 421 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 INTUQ9ULD6 942 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 IQANK1A0A1B0GTG1 560 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 IFNAR1P17181 557 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 SLC7A5Q01650 507 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 KIF19Q2TAC6 998 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 NEK9Q8TD19 979 aa14.61□□□□□ -0.07
CX3CL1-204ENST00000565912 NPR1P16066 1061 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 ALCAMQ13740 583 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 BZW1Q7L1Q6 419 aaKnown RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 MORC4Q8TE76 937 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 PIGOQ8TEQ8 1089 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 PDCD6IPQ8WUM4 868 aaKnown RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 PACSIN2Q9UNF0 486 aaPredicted RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 SRPRBQ9Y5M8 271 aaKnown RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 ESRRBO95718 433 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 CA4P22748 312 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 RWDD2BP57060 319 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 ZNF772Q68DY9 489 aaPredicted RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 FRA10AC1Q70Z53 315 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 RNF14Q9UBS8 474 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 PNMA3Q9UL41 463 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 ITM2BQ9Y287 266 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 FOXP4Q8IVH2 680 aaPredicted RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 SCN4BQ8IWT1 228 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 HSPA4LO95757 839 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 GIPC2Q8TF65 315 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 SUFUQ9UMX1 484 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 ZNF335Q9H4Z2 1342 aaPredicted RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 GH2P01242 217 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 TAC1P20366 129 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 GRAPQ13588 217 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 SRRM1Q8IYB3 904 aaKnown RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 ZMYND12Q9H0C1 365 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 SCINQ9Y6U3 715 aa14.6□□□□□ -0.07
CX3CL1-204ENST00000565912 ACSL3O95573 720 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 ESRRAP11474 423 aaPredicted RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 TAF1BQ53T94 588 aaPredicted RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 SNX19Q92543 992 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 FMO2Q99518 471 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 PIH1D3Q9NQM4 214 aaKnown RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 TMEM247A6NEH6 219 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 NDUFA10O95299 355 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 PAMP19021 973 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 CACNB3P54284 484 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 GLE1Q53GS7 698 aaKnown RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 SLC27A3Q5K4L6 730 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 ENOX1Q8TC92 643 aaKnown RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 AIFM3Q96NN9 605 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 ZBTB18Q99592 522 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 EDEM3Q9BZQ6 932 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 TXLNGQ9NUQ3 528 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 SUGT1Q9Y2Z0 365 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 LDHAP00338 332 aaKnown RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 RTKN2Q8IZC4 609 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 NCLNQ969V3 563 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 TUBB6Q9BUF5 446 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 CNOT10Q9H9A5 744 aaKnown RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 KLHL8Q9P2G9 620 aaPredicted RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 TMEM259Q4ZIN3 620 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 ALKBH5Q6P6C2 394 aaKnown RBP14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 SERPINI1Q99574 410 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 ADAMTS1Q9UHI8 967 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 CLASP1Q7Z460 1538 aa14.59□□□□□ -0.07
CX3CL1-204ENST00000565912 DRP2Q13474 957 aa14.58□□□□□ -0.07
CX3CL1-204ENST00000565912 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.07
CX3CL1-204ENST00000565912 C21orf2O43822 256 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 TTLL6Q8N841 843 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 KLC2Q9H0B6 622 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 PHLPP2Q6ZVD8 1323 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 VGLL3A8MV65 326 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 NEMP1O14524 444 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 PLEKHA8P1O95397 391 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 PAPOLAP51003 745 aaKnown RBP14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 LRRC63Q05C16 580 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 SUN2Q9UH99 717 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 PFDN1O60925 122 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 ATP6V1E1P36543 226 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 RASGRF1Q13972 1273 aa14.58□□□□□ -0.08
CX3CL1-204ENST00000565912 TBCCQ15814 346 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms