RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 FDPSP14324 419 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 UGCGQ16739 394 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 Q4G0T1 1027 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 ZNF484Q5JVG2 852 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 TSHZ1Q6ZSZ6 1077 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 NSUN7Q8NE18 718 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 GDPD5Q8WTR4 605 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 BBXQ8WY36 941 aaPredicted RBP15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 RIT2Q99578 217 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 MAFBQ9Y5Q3 323 aaPredicted RBP15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 PRRC2BQ5JSZ5 2229 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 COL1A2P08123 1366 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 GTPBP6O43824 516 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 MARCH6O60337 910 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 CCNT1O60563 726 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 KRT2P35908 639 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 JAK3P52333 1124 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 PRKCEQ02156 737 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 NR5A1Q13285 461 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 SKIV2LQ15477 1246 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 EARS2Q5JPH6 523 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 NEK8Q86SG6 692 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 ZNF668Q96K58 619 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 CELF4Q9BZC1 486 aaKnown RBP15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 BRMS1Q9HCU9 246 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 INSL6Q9Y581 213 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 IGSF9BQ9UPX0 1349 aa15.37■□□□□ 0.05
VPS9D1-204ENST00000565023 ZBTB42B2RXF5 422 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 ZNF862O60290 1169 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 PSMD10O75832 226 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 VTNP04004 478 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 OATP04181 439 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 COL9A1P20849 921 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 CLCN3P51790 818 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 ST3GAL1Q11201 340 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 NFX1Q12986 1120 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 PAK2Q13177 524 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 GRB10Q13322 594 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 LRRC71Q8N4P6 559 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 TOP1MTQ969P6 601 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 TGS1Q96RS0 853 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 SH2D3AQ9BRG2 576 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 C17orf80Q9BSJ5 609 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 CDHR5Q9HBB8 845 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 SEPT9Q9UHD8 586 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 PADI3Q9ULW8 664 aa15.36■□□□□ 0.05
VPS9D1-204ENST00000565023 CYP3A7-CYP3A51PA0A087WV96 503 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 TMEM150BA6NC51 233 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 ENPP3O14638 875 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 ST18O60284 1047 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 C22orf31O95567 290 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 RPLP2P05387 115 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 CYP3A7P24462 503 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 SFNP31947 248 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 TRIM29Q14134 588 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 KIZQ2M2Z5 673 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 MTERF2Q49AM1 385 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 MOXD1Q6UVY6 613 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 KIAA0319LQ8IZA0 1049 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 BANK1Q8NDB2 785 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 ETNPPLQ8TBG4 499 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 FAM167AQ96KS9 214 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 OSMRQ99650 979 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 SUGCTQ9HAC7 445 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 NRBP2Q9NSY0 501 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 AKT3Q9Y243 479 aa15.35■□□□□ 0.05
VPS9D1-204ENST00000565023 RPS6KA5O75582 802 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 ATP2B1P20020 1258 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 HTRA4P83105 476 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 EFCAB12Q6NXP0 572 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 NME8Q8N427 588 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 LINC01599Q8WXQ3 324 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 MBOAT7Q96N66 472 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 CEP131Q9UPN4 1083 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 NOC2LQ9Y3T9 749 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 MTCH2Q9Y6C9 303 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 TTC3P53804 2025 aa15.34■□□□□ 0.05
VPS9D1-204ENST00000565023 DDX11L8A8MPP1 907 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 BTBD18B2RXH4 712 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 EML1O00423 815 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 CSPG5O95196 566 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 ERVK-21P61565 698 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 NCAPH2Q6IBW4 605 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 RTN4RL1Q86UN2 441 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 DIS3L2Q8IYB7 885 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 FBXO22Q8NEZ5 403 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 TMEM40Q8WWA1 233 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 SCLT1Q96NL6 688 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 MAP7D2Q96T17 732 aa15.33■□□□□ 0.04
VPS9D1-204ENST00000565023 MAGEB2O15479 319 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 LPXNO60711 386 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 CD2BP2O95400 341 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms