RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 EYA4O95677 639 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 GNAT2P19087 354 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 IL32P24001 234 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 IL4RP24394 825 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 SERPINB3P29508 390 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 SEC24CP53992 1094 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 NLRP6P59044 892 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 NOP14P78316 857 aaKnown RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 SPAG1Q07617 926 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 AIMP1Q12904 312 aaKnown RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ACVR2BQ13705 512 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 KRT32Q14532 448 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 KARSQ15046 597 aaKnown RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 INSCQ1MX18 579 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 C4orf46Q504U0 113 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 NAALADL2Q58DX5 795 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ODF2Q5BJF6 829 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 HERC4Q5GLZ8 1057 aaPredicted RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 CCNJQ5T5M9 372 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 C8orf74Q6P047 294 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 AGMOQ6ZNB7 445 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 WAPLQ7Z5K2 1190 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 SLC51BQ86UW2 128 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 NDUFAF2Q8N183 169 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 CSGALNACT2Q8N6G5 542 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ARL6IP6Q8N6S5 226 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 FSIP1Q8NA03 581 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 MINDY2Q8NBR6 621 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 LRRC8CQ8TDW0 803 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 DDI1Q8WTU0 396 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 PYROXD1Q8WU10 500 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 AFG1LQ8WV93 481 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ATXN2LQ8WWM7 1075 aaKnown RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ABTB1Q969K4 478 aaPredicted RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 RNF25Q96BH1 459 aaPredicted RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 RMDN1Q96DB5 314 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 CLIP3Q96DZ5 547 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 LRGUKQ96M69 825 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 CFAP57Q96MR6 1250 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 CEP63Q96MT8 703 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 INO80BQ9C086 356 aaPredicted RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ASCC2Q9H1I8 757 aaPredicted RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ECT2Q9H8V3 914 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 CNGB3Q9NQW8 809 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 GDF3Q9NR23 364 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 HMG20BQ9P0W2 317 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 UVRAGQ9P2Y5 699 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 HSFX1Q9UBD0 423 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 XPO7Q9UIA9 1087 aaKnown RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 PALD1Q9ULE6 856 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 STXBP5LQ9Y2K9 1186 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ARIH1Q9Y4X5 557 aaPredicted RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 PCDHB4Q9Y5E5 795 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 SCINQ9Y6U3 715 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 SETBP1Q9Y6X0 1596 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 LRRIQ1Q96JM4 1722 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 FAM237AA0A1B0GTK4 181 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ZNF233A6NK53 670 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 H3BQV1 296 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 FBP2O00757 339 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 XPOTO43592 962 aaKnown RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 SULT1B1O43704 296 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ADCY3O60266 1144 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 MFAP3LO75121 409 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 GUCY1B2O75343 617 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 GABBR2O75899 941 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 UNC5CO95185 931 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 PDHA1P08559 390 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 RARAP10276 462 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ZNF18P17022 549 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 KRT2P35908 639 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 CETN2P41208 172 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 PCYT1AP49585 367 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 FXR2P51116 673 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 HNRNPFP52597 415 aaKnown RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 KIF11P52732 1056 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 OLR1P78380 273 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 IRX4P78413 519 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 RNASELQ05823 741 aaKnown RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 NIPAL4Q0D2K0 466 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 AP1B1Q10567 949 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 MTX1Q13505 466 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 RCN2Q14257 317 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 PLS1Q14651 629 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 EPHA7Q15375 998 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 Q3C1V9 767 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 DPCR1Q3MIW9 517 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 SGO2Q562F6 1265 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 EAPPQ56P03 285 aaPredicted RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 FOXB2Q5VYV0 432 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 KCTD16Q68DU8 428 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 RNF43Q68DV7 783 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 SIGIRRQ6IA17 410 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 PPP4R3CPQ6ZMV5 832 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 FRA10AC1Q70Z53 315 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ITIH5Q86UX2 942 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms