RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SMPD1P17405 629 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 ZNF445P59923 1031 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 PSMC5P62195 406 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 SMAD3P84022 425 aaKnown RBP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 AMPD3Q01432 767 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 ARHGAP1Q07960 439 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 LAMC2Q13753 1193 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 SNX17Q15036 470 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 UGCGQ16739 394 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 CCDC144BQ3MJ40 725 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 DUSP28Q4G0W2 176 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 SEPT1Q8WYJ6 367 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 ATP6V0A1Q93050 837 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 SPATA33Q96N06 139 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 MTRQ99707 1265 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 LRRC27Q9C0I9 530 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 KBTBD4Q9NVX7 518 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 KIAA1468Q9P260 1216 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 WRAP73Q9P2S5 460 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-205ENST00000564899 GABBR1Q9UBS5 961 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 NRBP1Q9UHY1 535 aa12.36□□□□□ -0.43
SF3B3-205ENST00000564899 A0A087WWV3 80 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 GSTTP1A0A1W2PQM5 241 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 SMC2O95347 1197 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 ATG7O95352 703 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 LYPLA2O95372 231 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 EYA4O95677 639 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 MYL1P05976 194 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 CASP1P29466 404 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 PSMC6P62333 389 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 TNFAIP2Q03169 654 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 CUL4BQ13620 913 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 SWSAP1Q6NVH7 229 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 SASS6Q6UVJ0 657 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 CCDC60Q8IWA6 550 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-205ENST00000564899 C4orf19Q8IY42 314 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 PIGOQ8TEQ8 1089 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 GPR20Q99678 358 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 ZNF302Q9NR11 478 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 PRKAG2Q9UGJ0 569 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 IGSF9BQ9UPX0 1349 aa12.35□□□□□ -0.43
SF3B3-205ENST00000564899 MCM3APO60318 1980 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 CCDC192P0DO97 292 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 PTGS1P23219 599 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 TCF7P36402 384 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-205ENST00000564899 SLC12A3P55017 1021 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 ASIC1P78348 528 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 DPYDQ12882 1025 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 HSDL1Q3SXM5 330 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 FAM160B1Q5W0V3 765 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 GPBP1Q86WP2 473 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 SYT2Q8N9I0 419 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-205ENST00000564899 OR6J1Q8NGC5 347 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-205ENST00000564899 LENG1Q96BZ8 264 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-205ENST00000564899 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
SF3B3-205ENST00000564899 TRIM9Q9C026 710 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 AZI2Q9H6S1 392 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 TUBE1Q9UJT0 475 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
SF3B3-205ENST00000564899 MYO9BQ13459 2157 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 IGKV6D-21A0A0A0MT36 114 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 ARHGEF35A5YM69 484 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 MYMKA6NI61 221 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 BIN1O00499 593 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 ZBTB39O15060 712 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 ADCY6O43306 1168 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 KRT18P05783 430 aaKnown RBP12.33□□□□□ -0.44
SF3B3-205ENST00000564899 AKR1A1P14550 325 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 YWHABP31946 246 aaKnown RBP12.33□□□□□ -0.44
SF3B3-205ENST00000564899 PRKCEQ02156 737 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 TLE2Q04725 743 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 TYRO3Q06418 890 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 LRRC41Q15345 812 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
SF3B3-205ENST00000564899 PPTC7Q8NI37 304 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 AFAP1L1Q8TED9 768 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 AFG1LQ8WV93 481 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 PCYT2Q99447 389 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 C7orf25Q9BPX7 421 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 FUCA2Q9BTY2 467 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-205ENST00000564899 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
SF3B3-205ENST00000564899 GNEQ9Y223 722 aaKnown RBP12.33□□□□□ -0.44
SF3B3-205ENST00000564899 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-205ENST00000564899 DYNC1LI2O43237 492 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 ZNF862O60290 1169 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 MSCO60682 206 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 LGR5O75473 907 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 OATP04181 439 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 RPN1P04843 607 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms