RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 FAM49AQ9H0Q0 323 aaPredicted RBP17.88■□□□□ 0.45
RAB40C-208ENST00000564703 SUGCTQ9HAC7 445 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 CLIC4Q9Y696 253 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 UMODL1Q5DID0 1318 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 SMIM35A0A1B0GVV1 85 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 MUTP22033 750 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 RPA1P27694 616 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 BMP8BP34820 402 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 RBL2Q08999 1139 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 XKR9Q5GH70 373 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 EFCAB12Q6NXP0 572 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 RUFY4Q6ZNE9 571 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 CATSPER3Q86XQ3 398 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 NACC1Q96RE7 527 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 FTOQ9C0B1 505 aaKnown RBP eCLIP17.87■□□□□ 0.45
RAB40C-208ENST00000564703 PPME1Q9Y570 386 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 ATP6V1DQ9Y5K8 247 aa17.87■□□□□ 0.45
RAB40C-208ENST00000564703 TNRC18O15417 2968 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-208ENST00000564703 LYPLA2O95372 231 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 TRIM71Q2Q1W2 868 aaKnown RBP17.86■□□□□ 0.45
RAB40C-208ENST00000564703 ATL3Q6DD88 541 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 ANO5Q75V66 913 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 DEFB128Q7Z7B8 93 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 RPAINQ86UA6 219 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 IGSF22Q8N9C0 903 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 SNX29Q8TEQ0 813 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 SLC7A3Q8WY07 619 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 WNT8AQ9H1J5 351 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 IL23AQ9NPF7 189 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 CYP26B1Q9NR63 512 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 ANKEF1Q9NU02 776 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 TFIP11Q9UBB9 837 aaKnown RBP17.86■□□□□ 0.45
RAB40C-208ENST00000564703 CFAP45Q9UL16 551 aa17.86■□□□□ 0.45
RAB40C-208ENST00000564703 ZBTB42B2RXF5 422 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 STBD1O95210 358 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 C22orf31O95567 290 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 FGBP02675 491 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 PFKMP08237 780 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 NPEPPSP55786 919 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 PKP1Q13835 747 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 STK38Q15208 465 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 TARBP2Q15633 366 aaKnown RBP17.85■□□□□ 0.45
RAB40C-208ENST00000564703 IL17AQ16552 155 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 FOXD4L6Q3SYB3 417 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-208ENST00000564703 FOXD4L3Q6VB84 417 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-208ENST00000564703 WNT8BQ93098 351 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 ZBTB10Q96DT7 871 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 AK8Q96MA6 479 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 USP28Q96RU2 1077 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 MAP7D2Q96T17 732 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 SH2D3AQ9BRG2 576 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 PCDH10Q9P2E7 1040 aa17.85■□□□□ 0.45
RAB40C-208ENST00000564703 WRAP73Q9P2S5 460 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-208ENST00000564703 EVPLQ92817 2033 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 TMEM150BA6NC51 233 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 MED24O75448 989 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 CTSHP09668 335 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 SPATA31C1P0DKV0 1188 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 ACRP10323 421 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 ACTN1P12814 892 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 MARCKSP29966 332 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-208ENST00000564703 LONP1P36776 959 aaKnown RBP17.84■□□□□ 0.45
RAB40C-208ENST00000564703 RFC5P40937 340 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 UBA7P41226 1012 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 POLGP54098 1239 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-208ENST00000564703 NUCB2P80303 420 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 CDC42EP1Q00587 391 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 SLC39A14Q15043 492 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 ZRSR1Q15695 479 aaKnown RBP17.84■□□□□ 0.45
RAB40C-208ENST00000564703 PLA2G4FQ68DD2 849 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 KIAA0319LQ8IZA0 1049 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 ZNF710Q8N1W2 664 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 CDK5RAP3Q96JB5 506 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 MTIF3Q9H2K0 278 aaKnown RBP17.84■□□□□ 0.45
RAB40C-208ENST00000564703 KIAA1024Q9UPX6 916 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 DNM3Q9UQ16 869 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 COLQQ9Y215 455 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-208ENST00000564703 AKT3Q9Y243 479 aa17.84■□□□□ 0.45
RAB40C-208ENST00000564703 ZBTB39O15060 712 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 BRD1O95696 1058 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 CDC25AP30304 524 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 MRPS6P82932 125 aaKnown RBP17.83■□□□□ 0.44
RAB40C-208ENST00000564703 PTPAQ15257 358 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 FAM26DQ5JW98 314 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 PSRC1Q6PGN9 363 aaPredicted RBP17.83■□□□□ 0.44
RAB40C-208ENST00000564703 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 PIGOQ8TEQ8 1089 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 CELF4Q9BZC1 486 aaKnown RBP17.83■□□□□ 0.44
RAB40C-208ENST00000564703 NT5C3AQ9H0P0 336 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 GINS2Q9Y248 185 aa17.83■□□□□ 0.44
RAB40C-208ENST00000564703 A0A087WWV3 80 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 MAFO75444 373 aaPredicted RBP17.82■□□□□ 0.44
RAB40C-208ENST00000564703 CLCN3P51790 818 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 TMEM62Q0P6H9 643 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 LRRC71Q8N4P6 559 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 KCTD17Q8N5Z5 321 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 CALML4Q96GE6 196 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 DDX19AQ9NUU7 478 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms