RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TMCO2Q7Z6W1 182 aaPredicted RBP20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 GAS2L1Q99501 681 aaPredicted RBP20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 TRPV2Q9Y5S1 764 aa20.67■□□□□ 0.9
SYNGR3-204ENST00000564642 FAM205CA6NFA0 338 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 TBX3O15119 743 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 GUCY1B3Q02153 619 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 PRKCEQ02156 737 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 LPIN1Q14693 890 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 FBXO47Q5MNV8 452 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 FAM117BQ6P1L5 589 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 MYOCDQ8IZQ8 938 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 CELF4Q9BZC1 486 aaKnown RBP20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 PRDM12Q9H4Q4 367 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 KCNMB3Q9NPA1 279 aa20.66■□□□□ 0.9
SYNGR3-204ENST00000564642 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 MAGEB2O15479 319 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 ZNF862O60290 1169 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 GJB5O95377 273 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 UGCGQ16739 394 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 B3GNT9Q6UX72 402 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 TSHZ1Q6ZSZ6 1077 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 METTL13Q8N6R0 699 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 USP38Q8NB14 1042 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 RAD9AQ99638 391 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 SQORQ9Y6N5 450 aa20.65■□□□□ 0.9
SYNGR3-204ENST00000564642 C22orf31O95567 290 aa20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 PPP2R5CQ13362 524 aa20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 MKRN4PQ13434 485 aaPredicted RBP20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 POTEDQ86YR6 584 aa20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 SLFN12Q8IYM2 578 aa20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 KIAA0319LQ8IZA0 1049 aa20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 GINS2Q9Y248 185 aa20.64■□□□□ 0.89
SYNGR3-204ENST00000564642 TMOD1P28289 359 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 PSMC5P62195 406 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 EFCAB12Q6NXP0 572 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 BANK1Q8NDB2 785 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 HAS1Q92839 578 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 TBC1D32Q96NH3 1257 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 INSL6Q9Y581 213 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 VCANP13611 3396 aa20.63■□□□□ 0.89
SYNGR3-204ENST00000564642 KDM3AQ9Y4C1 1321 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 EML1O00423 815 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 DKC1O60832 514 aaKnown RBP eCLIP20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 UPP2O95045 317 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 CD52P31358 61 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 TAP1Q03518 808 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 GNL2Q13823 731 aaKnown RBP20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 XKR3Q5GH77 459 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 FBXO18Q8NFZ0 1043 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 MAFAQ8NHW3 353 aaPredicted RBP20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 TOP1MTQ969P6 601 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 AGO3Q9H9G7 860 aaKnown RBP20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 CERS4Q9HA82 394 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 SEPT9Q9UHD8 586 aaPredicted RBP20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 VAV3Q9UKW4 847 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 MYO9BQ13459 2157 aa20.62■□□□□ 0.89
SYNGR3-204ENST00000564642 DDX11L8A8MPP1 907 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 P4HBP07237 508 aaKnown RBP20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 ATP2B1P20020 1258 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 IGFBP4P22692 258 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 MCM2P49736 904 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 TBC1D8BQ0IIM8 1120 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 PAK2Q13177 524 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 CALCRLQ16602 461 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 MTERF2Q49AM1 385 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 NCAPH2Q6IBW4 605 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 MAP7D2Q96T17 732 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 NIFKQ9BYG3 293 aaKnown RBP20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 FOXP1Q9H334 677 aaPredicted RBP20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 SUGCTQ9HAC7 445 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 PCDHA12Q9UN75 941 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 AKT3Q9Y243 479 aa20.61■□□□□ 0.89
SYNGR3-204ENST00000564642 LCHNA4D1U4 455 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 ENPP3O14638 875 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 NEMFO60524 1076 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 VTNP04004 478 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 QARSP47897 775 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 CLCN3P51790 818 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 NFX1Q12986 1120 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 EPHA7Q15375 998 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 ODR4Q5SWX8 454 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 ARNTL2Q8WYA1 636 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 TMX3Q96JJ7 454 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 PPP1R16BQ96T49 567 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 FTHL17Q9BXU8 183 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 PADI3Q9ULW8 664 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 KIF3AQ9Y496 699 aa20.6■□□□□ 0.89
SYNGR3-204ENST00000564642 SPTBN5Q9NRC6 3674 aaKnown RBP20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 ARHGEF15O94989 841 aa20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 COL9A1P20849 921 aa20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 CRYBB1P53674 252 aaPredicted RBP20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 TARBP2Q15633 366 aaKnown RBP20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 KIZQ2M2Z5 673 aa20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 ZNF710Q8N1W2 664 aa20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 LRRC71Q8N4P6 559 aa20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 YME1L1Q96TA2 773 aa20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 CDHR5Q9HBB8 845 aa20.59■□□□□ 0.89
SYNGR3-204ENST00000564642 RPS6KA5O75582 802 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms