RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 AGBL2Q5U5Z8 902 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 KLHDC7AQ5VTJ3 777 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 SLFN13Q68D06 897 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 PEX26Q7Z412 305 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 TXNRD3Q86VQ6 643 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 UBL4BQ8N7F7 174 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 SLC44A5Q8NCS7 719 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 BCAS4Q8TDM0 211 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 CHURC1Q8WUH1 139 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 NLRP7Q8WX94 980 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 CTNNBL1Q8WYA6 563 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 COA7Q96BR5 231 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 OTUD5Q96G74 571 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 NACC1Q96RE7 527 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 CEP89Q96ST8 783 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 LRRC1Q9BTT6 524 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 ZHX3Q9H4I2 956 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 TMEM206Q9H813 350 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 TRIM10Q9UDY6 481 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 FEZ2Q9UHY8 353 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 TTC7AQ9ULT0 858 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-249ENST00000564606 LHX6Q9UPM6 363 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 MYH8P13535 1937 aa8.33□□□□□ -1.08
ATXN3-249ENST00000564606 FRMPD2Q68DX3 1309 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 POTEMA6NI47 508 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 RASSF10A6NK89 507 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 TMCO5BA8MYB1 307 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 PIK3CDO00329 1044 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 NDUFAB1O14561 156 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 SLC37A4O43826 429 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 DKC1O60832 514 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 ENTPD3O75355 529 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 KIF4AO95239 1232 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 UCHL3P15374 230 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 VEGFAP15692 232 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 CYP11B2P19099 503 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 MAN1A1P33908 653 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 MATR3P43243 847 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 MMP14P50281 582 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 IRAK1P51617 712 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 GNGT1P63211 74 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 ATP2B2Q01814 1243 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 LMNB2Q03252 620 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 GFPT1Q06210 699 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 PICALMQ13492 652 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 DHX34Q14147 1143 aaKnown RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 HLTFQ14527 1009 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 PLCB4Q15147 1175 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 C6orf132Q5T0Z8 1188 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 HGSNATQ68CP4 663 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 ALKBH5Q6P6C2 394 aaKnown RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 LRRC31Q6UY01 552 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 FAM160B2Q86V87 743 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 OTUD6BQ8N6M0 293 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 DRC1Q96MC2 740 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 ZDHHC15Q96MV8 337 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 PAGR1Q9BTK6 254 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 TLR10Q9BXR5 811 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 IDI2Q9BXS1 227 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 KCTD10Q9H3F6 313 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 ACTR5Q9H9F9 607 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 EPB41L5Q9HCM4 733 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 GOPCQ9HD26 462 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 NLRC4Q9NPP4 1024 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 TMEM260Q9NX78 707 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 MTRF1LQ9UGC7 380 aaKnown RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 LCMT1Q9UIC8 334 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 HERC5Q9UII4 1024 aaKnown RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 MRPL11Q9Y3B7 192 aaKnown RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 CAPN6Q9Y6Q1 641 aa8.32□□□□□ -1.08
ATXN3-249ENST00000564606 COL2A1P02458 1487 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-249ENST00000564606 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 H0YHG0 523 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 PODXLO00592 558 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 KCNK3O14649 394 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 MAPK13O15264 365 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 PLA2G6O60733 806 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 CPP00450 1065 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 TMEM253P0C7T8 217 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 BMP3P12645 472 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 AKR1B1P15121 316 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 INPP5BP32019 993 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 HSPA9P38646 679 aaKnown RBP8.31□□□□□ -1.08
ATXN3-249ENST00000564606 SLC12A3P55017 1021 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 GUCY2DQ02846 1103 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 ICA1Q05084 483 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 ENPEPQ07075 957 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 QRICH1Q2TAL8 776 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 SLC4A8Q2Y0W8 1093 aa8.31□□□□□ -1.08
ATXN3-249ENST00000564606 ODF2Q5BJF6 829 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms