RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 SCN10AQ9Y5Y9 1956 aa17.15■□□□□ 0.34
SCAMP2-205ENST00000564529 RFXAPO00287 272 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 SLITRK3O94933 977 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 STBD1O95210 358 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 LYPLA2O95372 231 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 P4HBP07237 508 aaKnown RBP17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 ATP4AP20648 1035 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 MUTP22033 750 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 SP4Q02446 784 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 DNM1Q05193 864 aaKnown RBP17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 PTPN11Q06124 597 aaPredicted RBP17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 FAM160B1Q5W0V3 765 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 NEK9Q8TD19 979 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 AK8Q96MA6 479 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 POLR3CQ9BUI4 534 aaPredicted RBP17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 RAB34Q9BZG1 259 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 AZI2Q9H6S1 392 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 ZNF302Q9NR11 478 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 TFIP11Q9UBB9 837 aaKnown RBP17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 IGSF9BQ9UPX0 1349 aa17.14■□□□□ 0.33
SCAMP2-205ENST00000564529 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 SLC26A4O43511 780 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 PSEN2P49810 448 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 PSMC5P62195 406 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 MFSD10Q14728 455 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 SKIV2LQ15477 1246 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 AAK1Q2M2I8 961 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 EIF2AK1Q9BQI3 630 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 C1QTNF1Q9BXJ1 281 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 TRMT13Q9NUP7 481 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 FBXO2Q9UK22 296 aaPredicted RBP17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 MTCH2Q9Y6C9 303 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 DOCK5Q9H7D0 1870 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 TRANK1O15050 2925 aa17.13■□□□□ 0.33
SCAMP2-205ENST00000564529 ZNF862O60290 1169 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 DKC1O60832 514 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 CA3P07451 260 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 CYP2C9P11712 490 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 RPA1P27694 616 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 QARSP47897 775 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 ADAM17P78536 824 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 KIAA0753Q2KHM9 967 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 NBPF20Q3BBV1 942 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 C4orf19Q8IY42 314 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 GLG1Q92896 1179 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 ATP6V0A1Q93050 837 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 RNPEPQ9H4A4 650 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 CERS4Q9HA82 394 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 TUFT1Q9NNX1 390 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 LRWD1Q9UFC0 647 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 SAMM50Q9Y512 469 aa17.12■□□□□ 0.33
SCAMP2-205ENST00000564529 EPOPA6NHQ4 379 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 POTEMA6NI47 508 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 SPTLC2O15270 562 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 CHMP2AO43633 222 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 HBP1O60381 514 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 PFKMP08237 780 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 POU3F3P20264 500 aaPredicted RBP17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 KRT85P78386 507 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 PLCB4Q15147 1175 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 HYIQ5T013 277 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 TRIM50Q86XT4 487 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 BBXQ8WY36 941 aaPredicted RBP17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 NIFKQ9BYG3 293 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
SCAMP2-205ENST00000564529 BACH1O14867 736 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 GRIN1Q05586 938 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 STK38Q15208 465 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 UGCGQ16739 394 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 CATSPER3Q86XQ3 398 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 KRI1Q8N9T8 703 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 ERMNQ8TAM6 284 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 FAM167AQ96KS9 214 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 SCAND2PQ9GZW5 306 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 RGL1Q9NZL6 768 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 WRAP73Q9P2S5 460 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 GTF2IRD1Q9UHL9 959 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 NRCAMQ92823 1304 aa17.1■□□□□ 0.33
SCAMP2-205ENST00000564529 POTEB3A0JP26 581 aa17.09■□□□□ 0.33
SCAMP2-205ENST00000564529 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms