RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 SPATA31C1P0DKV0 1188 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 SYN1P17600 705 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 KLRC1P26715 233 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 MAGEA10P43363 369 aaPredicted RBP18.66■□□□□ 0.58
RNF40-206ENST00000564260 HYIQ5T013 277 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 PSRC1Q6PGN9 363 aaPredicted RBP18.66■□□□□ 0.58
RNF40-206ENST00000564260 LRRC8DQ7L1W4 858 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 CATSPER3Q86XQ3 398 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 TPH2Q8IWU9 490 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 USP38Q8NB14 1042 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 SPRYD3Q8NCJ5 442 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 SLC7A3Q8WY07 619 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 CYP26B1Q9NR63 512 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 RGL1Q9NZL6 768 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 SRPRBQ9Y5M8 271 aaKnown RBP18.66■□□□□ 0.58
RNF40-206ENST00000564260 DDX11L8A8MPP1 907 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 M0QZ92 97 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 MAFO75444 373 aaPredicted RBP18.65■□□□□ 0.58
RNF40-206ENST00000564260 DDIT3P35638 169 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 THPOP40225 353 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 DNM2P50570 870 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 IGBP1P78318 339 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 ZNF200P98182 395 aaPredicted RBP18.65■□□□□ 0.58
RNF40-206ENST00000564260 CYP4A11Q02928 519 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 LINC01465Q8N7H1 131 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 KCNG4Q8TDN1 519 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 BADQ92934 168 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 USP28Q96RU2 1077 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 PPP1R12CQ9BZL4 782 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 WNT8AQ9H1J5 351 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 CLIC4Q9Y696 253 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 LTBP2Q14767 1821 aa18.65■□□□□ 0.58
RNF40-206ENST00000564260 VWA3AA6NCI4 1184 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 RSPH10B2B2RC85 870 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 DGAT1O75907 488 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 CXCL10P02778 98 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 RSPH10BP0C881 870 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 ITGB8P26012 769 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 CTTNQ14247 550 aaKnown RBP18.64■□□□□ 0.57
RNF40-206ENST00000564260 IL17AQ16552 155 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 LINC00301Q8NCQ3 95 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 SNX29Q8TEQ0 813 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 CEP170P1Q96L14 293 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 CCDC43Q96MW1 224 aaKnown RBP18.64■□□□□ 0.57
RNF40-206ENST00000564260 MAP7D2Q96T17 732 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 PRO3102Q9H379 93 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 DHX33Q9H6R0 707 aaKnown RBP18.64■□□□□ 0.57
RNF40-206ENST00000564260 IL23AQ9NPF7 189 aa18.64■□□□□ 0.57
RNF40-206ENST00000564260 WRAP73Q9P2S5 460 aaPredicted RBP18.64■□□□□ 0.57
RNF40-206ENST00000564260 MYH9P35579 1960 aaKnown RBP18.64■□□□□ 0.57
RNF40-206ENST00000564260 EFCAB14O75071 495 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 MED24O75448 989 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 CYP2C18P33260 490 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 CCT6AP40227 531 aaKnown RBP18.63■□□□□ 0.57
RNF40-206ENST00000564260 UBA7P41226 1012 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 PKP1Q13835 747 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 ODR4Q5SWX8 454 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 KRI1Q8N9T8 703 aaKnown RBP18.63■□□□□ 0.57
RNF40-206ENST00000564260 ZNF579Q8NAF0 562 aaKnown RBP18.63■□□□□ 0.57
RNF40-206ENST00000564260 TCP11Q8WWU5 503 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 CCSER1Q9C0I3 900 aa18.63■□□□□ 0.57
RNF40-206ENST00000564260 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
RNF40-206ENST00000564260 SPTLC2O15270 562 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 TXLNAP40222 546 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 RARRES1P49788 294 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 KRT85P78386 507 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 MRPS6P82932 125 aaKnown RBP18.62■□□□□ 0.57
RNF40-206ENST00000564260 STK38Q15208 465 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 MTERF2Q49AM1 385 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 ZNF618Q5T7W0 954 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 TRAF7Q6Q0C0 670 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 RUFY4Q6ZNE9 571 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 KIAA0319LQ8IZA0 1049 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 APBB2Q92870 758 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 KCND2Q9NZV8 630 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 FBXO2Q9UK22 296 aaPredicted RBP18.62■□□□□ 0.57
RNF40-206ENST00000564260 DNM3Q9UQ16 869 aa18.62■□□□□ 0.57
RNF40-206ENST00000564260 UMODL1Q5DID0 1318 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 ASAP2O43150 1006 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 BAIAP3O94812 1187 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 ACTN1P12814 892 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 CSF2RAP15509 400 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 POLGP54098 1239 aaPredicted RBP18.61■□□□□ 0.57
RNF40-206ENST00000564260 CCL23P55773 120 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 MDM2Q00987 491 aaPredicted RBP18.61■□□□□ 0.57
RNF40-206ENST00000564260 MGAT3Q09327 533 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 XKR9Q5GH70 373 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 EFCAB12Q6NXP0 572 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 FAM173BQ6P4H8 233 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 METTL13Q8N6R0 699 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 MCPH1Q8NEM0 835 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 DNAJB3Q8WWF6 145 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 WNT8BQ93098 351 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 CALML4Q96GE6 196 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 MMTAG2Q9BU76 263 aaKnown RBP18.61■□□□□ 0.57
RNF40-206ENST00000564260 TIPINQ9BVW5 301 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 UBE2OQ9C0C9 1292 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms