RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 NEK11Q8NG66 645 aa19.55■□□□□ 0.72
GDE1-203ENST00000564172 RUSC1Q9BVN2 902 aa19.55■□□□□ 0.72
GDE1-203ENST00000564172 SAMSN1Q9NSI8 373 aaKnown RBP19.55■□□□□ 0.72
GDE1-203ENST00000564172 SLC9A2Q9UBY0 812 aa19.55■□□□□ 0.72
GDE1-203ENST00000564172 PCDHA10Q9Y5I2 948 aa19.55■□□□□ 0.72
GDE1-203ENST00000564172 FRMD3A2A2Y4 597 aa19.54■□□□□ 0.72
GDE1-203ENST00000564172 COBLO75128 1261 aa19.54■□□□□ 0.72
GDE1-203ENST00000564172 ZKSCAN8Q15776 578 aaPredicted RBP19.54■□□□□ 0.72
GDE1-203ENST00000564172 PACS2Q86VP3 889 aa19.54■□□□□ 0.72
GDE1-203ENST00000564172 DHTKD1Q96HY7 919 aaPredicted RBP19.54■□□□□ 0.72
GDE1-203ENST00000564172 REEP2Q9BRK0 252 aa19.54■□□□□ 0.72
GDE1-203ENST00000564172 ZCCHC17Q9NP64 241 aaKnown RBP19.54■□□□□ 0.72
GDE1-203ENST00000564172 PSMA7O14818 248 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 STRNO43815 780 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 LYPLA2O95372 231 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 PPP1R2P41236 205 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 FANCCQ00597 558 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 HSP90AA4PQ58FG1 418 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 EEPD1Q7L9B9 569 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 ABRAQ8N0Z2 381 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 PPM1EQ8WY54 764 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 TACO1Q9BSH4 297 aaKnown RBP19.53■□□□□ 0.72
GDE1-203ENST00000564172 FAM155AB1AL88 458 aaPredicted RBP19.53■□□□□ 0.72
GDE1-203ENST00000564172 ADORA2AP29274 412 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 INHBEP58166 350 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 PSMC5P62195 406 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 UGCGQ16739 394 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 HERC4Q5GLZ8 1057 aaPredicted RBP19.53■□□□□ 0.72
GDE1-203ENST00000564172 C1orf186Q6ZWK4 172 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 C4orf19Q8IY42 314 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 MORC4Q8TE76 937 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 MRFAP1L1Q96HT8 127 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
GDE1-203ENST00000564172 TGFB3P10600 412 aa19.52■□□□□ 0.72
GDE1-203ENST00000564172 MAP2K2P36507 400 aa19.52■□□□□ 0.72
GDE1-203ENST00000564172 PMS1P54277 932 aaKnown RBP19.52■□□□□ 0.72
GDE1-203ENST00000564172 FAM26FQ5R3K3 315 aa19.52■□□□□ 0.72
GDE1-203ENST00000564172 CYFIP1Q7L576 1253 aa19.52■□□□□ 0.72
GDE1-203ENST00000564172 IFNKQ9P0W0 207 aa19.52■□□□□ 0.72
GDE1-203ENST00000564172 ABT1Q9ULW3 272 aaKnown RBP19.52■□□□□ 0.72
GDE1-203ENST00000564172 IVNS1ABPQ9Y6Y0 642 aa19.52■□□□□ 0.72
GDE1-203ENST00000564172 TRIM49BA6NDI0 452 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 CPP00450 1065 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 IVLP07476 585 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 PLA2G4AP47712 749 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 ACTR2P61160 394 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 SP4Q02446 784 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 C11orf91Q3C1V1 193 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 ZNF792Q3KQV3 632 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 GPR142Q7Z601 462 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 CCDC102AQ96A19 550 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 UBXN6Q9BZV1 441 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 CPA4Q9UI42 421 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 PCDHA2Q9Y5H9 948 aa19.52■□□□□ 0.71
GDE1-203ENST00000564172 ZNFX1Q9P2E3 1918 aaKnown RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 SORBS3O60504 671 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 UBA1P22314 1058 aaKnown RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 TAF1CQ15572 869 aaPredicted RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 TPD52L1Q16890 204 aaPredicted RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 ABHD15Q6UXT9 468 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 IFNL1Q8IU54 200 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 GUF1Q8N442 669 aaKnown RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 GLIS3Q8NEA6 775 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 ANKRD20A12PQ8NF67 263 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 XPO4Q9C0E2 1151 aaKnown RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 ZHX3Q9H4I2 956 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 DBR1Q9UK59 544 aaKnown RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 ADGRA2Q96PE1 1338 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 ASB14A6NK59 587 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 CCNE1P24864 410 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 CDC25BP30305 580 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 YWHABP31946 246 aaKnown RBP19.51■□□□□ 0.71
GDE1-203ENST00000564172 CDKAL1Q5VV42 579 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 P2RX5Q93086 422 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 KCND2Q9NZV8 630 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 TBC1D7Q9P0N9 293 aa19.51■□□□□ 0.71
GDE1-203ENST00000564172 ARHGEF35A5YM69 484 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 TMEM88BA6NKF7 163 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 RSPH10B2B2RC85 870 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 SERPINC1P01008 464 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 PSAPP07602 524 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 RSPH10BP0C881 870 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 MAPK4P31152 587 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 RARRES1P49788 294 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 LRRC41Q15345 812 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 TTI2Q6NXR4 508 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 SPC24Q8NBT2 197 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 POLD4Q9HCU8 107 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 GABBR1Q9UBS5 961 aa19.5■□□□□ 0.71
GDE1-203ENST00000564172 ZNF215Q9UL58 517 aaPredicted RBP19.5■□□□□ 0.71
GDE1-203ENST00000564172 PNMA6AP0CW24 399 aaPredicted RBP19.49■□□□□ 0.71
GDE1-203ENST00000564172 UBASH3AP57075 661 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 NEDD9Q14511 834 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 DNAJC21Q5F1R6 531 aaKnown RBP19.49■□□□□ 0.71
GDE1-203ENST00000564172 CENPPQ6IPU0 288 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 SWSAP1Q6NVH7 229 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 MMS22LQ6ZRQ5 1243 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 C16orf45Q96MC5 204 aaPredicted RBP19.49■□□□□ 0.71
GDE1-203ENST00000564172 FGFBP2Q9BYJ0 223 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms