RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TRPM8Q7Z2W7 1104 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-209ENST00000564068 GRK7Q8WTQ7 553 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 TMEM47Q9BQJ4 181 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 A0A087X0T9 212 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 FAM228BP0C875 321 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 BTDP43251 543 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 ZNF746Q6NUN9 644 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-209ENST00000564068 DNAAF5Q86Y56 855 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 ERGIC2Q96RQ1 377 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 ADAM33Q9BZ11 813 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 BHMT2Q9H2M3 363 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 DONSONQ9NYP3 566 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 DNAJC12Q9UKB3 198 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 RASA4BC9J798 803 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 RASA4O43374 803 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 GAS7O60861 476 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 RPS6KA5O75582 802 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 NAIF1Q69YI7 327 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-209ENST00000564068 PROM2Q8N271 834 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 MTMR8Q96EF0 704 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
COMMD4-209ENST00000564068 FAM217BQ9NTX9 383 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-209ENST00000564068 TXNDC16Q9P2K2 825 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 MYMKA6NI61 221 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 DLATP10515 647 aaKnown RBP13.61□□□□□ -0.23
COMMD4-209ENST00000564068 HP1BP3Q5SSJ5 553 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-209ENST00000564068 CCDC89Q8N998 374 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 CCDC110Q8TBZ0 833 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 ISCUQ9H1K1 167 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 FGFR1OP2Q9NVK5 253 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 TECPR2O15040 1411 aa13.61□□□□□ -0.23
COMMD4-209ENST00000564068 PODXLO00592 558 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 MAPK13O15264 365 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 HSPA6P17066 643 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 PSMD6Q15008 389 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 SEPT2Q15019 361 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 KCTD19Q17RG1 926 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-209ENST00000564068 TTI2Q6NXR4 508 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 AENQ8WTP8 325 aaKnown RBP13.6□□□□□ -0.23
COMMD4-209ENST00000564068 RAD54LQ92698 747 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 NUDCD1Q96RS6 583 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 PCDHA6Q9UN73 950 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 THRAP3Q9Y2W1 955 aaKnown RBP13.6□□□□□ -0.23
COMMD4-209ENST00000564068 PCDHA8Q9Y5H6 950 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 POTECB2RU33 542 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 K7ENM7 598 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 PAX7P23759 505 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 IL6STP40189 918 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-209ENST00000564068 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 LRIG3Q6UXM1 1119 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 CREG2Q8IUH2 290 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 LRRC37BQ96QE4 947 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 CYTH2Q99418 400 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 SH3GLB2Q9NR46 395 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 DCTN4Q9UJW0 460 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 A0A0G2JND7 137 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 MAPK4P31152 587 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 LONP2Q86WA8 852 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 SPZ1Q9BXG8 430 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 RCCD1A6NED2 376 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 TRAF1Q13077 416 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 TTMPQ5BVD1 217 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 SLFN12Q8IYM2 578 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 GLG1Q92896 1179 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 HEMGNQ9BXL5 484 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 EDEM3Q9BZQ6 932 aa13.6□□□□□ -0.23
COMMD4-209ENST00000564068 MAP7Q14244 749 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 NAB2Q15742 525 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 LRRC34Q8IZ02 419 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 MAK16Q9BXY0 300 aaKnown RBP13.59□□□□□ -0.23
COMMD4-209ENST00000564068 PACSIN1Q9BY11 444 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
COMMD4-209ENST00000564068 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 PFDN1O60925 122 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 ANP32DO95626 131 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 SLC9A1P19634 815 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 UBXN2AP68543 259 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 CCDC137Q6PK04 289 aaKnown RBP13.59□□□□□ -0.23
COMMD4-209ENST00000564068 HSD3B7Q9H2F3 369 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 BCS1LQ9Y276 419 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 L3MBTL1Q9Y468 752 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
COMMD4-209ENST00000564068 IGF2BP3O00425 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
COMMD4-209ENST00000564068 TROAPQ12815 778 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 SLC29A2Q14542 456 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 LONRF1Q17RB8 773 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 RFX8Q6ZV50 586 aa13.59□□□□□ -0.23
COMMD4-209ENST00000564068 TNNI1P19237 187 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 BATF3Q9NR55 127 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 LARSQ9P2J5 1176 aaKnown RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 USP15Q9Y4E8 981 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 ZNF804BA4D1E1 1349 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms