RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 FAM205CA6NFA0 338 aa15.05■□□□□ -0
CLK3-213ENST00000563842 ZNF862O60290 1169 aa15.05■□□□□ -0
CLK3-213ENST00000563842 NEMFO60524 1076 aa15.05■□□□□ -0
CLK3-213ENST00000563842 AMHP03971 560 aa15.05■□□□□ -0
CLK3-213ENST00000563842 ODR4Q5SWX8 454 aa15.05■□□□□ -0
CLK3-213ENST00000563842 TRMT1LQ7Z2T5 733 aaKnown RBP15.05■□□□□ -0
CLK3-213ENST00000563842 HERC6Q8IVU3 1022 aa15.05■□□□□ -0
CLK3-213ENST00000563842 HAS1Q92839 578 aa15.05■□□□□ -0
CLK3-213ENST00000563842 FAM161BQ96MY7 647 aa15.05■□□□□ -0
CLK3-213ENST00000563842 ZBED2Q9BTP6 218 aa15.05■□□□□ -0
CLK3-213ENST00000563842 CELF4Q9BZC1 486 aaKnown RBP15.05■□□□□ -0
CLK3-213ENST00000563842 NOL7Q9UMY1 257 aaKnown RBP15.05■□□□□ -0
CLK3-213ENST00000563842 PCDHA12Q9UN75 941 aa15.05■□□□□ -0
CLK3-213ENST00000563842 KDM3AQ9Y4C1 1321 aa15.05■□□□□ -0
CLK3-213ENST00000563842 TTC3P53804 2025 aa15.04■□□□□ -0
CLK3-213ENST00000563842 ZBTB42B2RXF5 422 aa15.04■□□□□ -0
CLK3-213ENST00000563842 P4HBP07237 508 aaKnown RBP15.04■□□□□ -0
CLK3-213ENST00000563842 GHRP10912 638 aa15.04■□□□□ -0
CLK3-213ENST00000563842 PBX2P40425 430 aa15.04■□□□□ -0
CLK3-213ENST00000563842 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
CLK3-213ENST00000563842 TRAPPC10P48553 1259 aa15.04■□□□□ -0
CLK3-213ENST00000563842 TBC1D8BQ0IIM8 1120 aa15.04■□□□□ -0
CLK3-213ENST00000563842 EPHA7Q15375 998 aa15.04■□□□□ -0
CLK3-213ENST00000563842 FBXO47Q5MNV8 452 aa15.04■□□□□ -0
CLK3-213ENST00000563842 TSHZ1Q6ZSZ6 1077 aa15.04■□□□□ -0
CLK3-213ENST00000563842 NOSTRINQ8IVI9 506 aa15.04■□□□□ -0
CLK3-213ENST00000563842 EXOC8Q8IYI6 725 aa15.04■□□□□ -0
CLK3-213ENST00000563842 METTL13Q8N6R0 699 aa15.04■□□□□ -0
CLK3-213ENST00000563842 MAP7D2Q96T17 732 aa15.04■□□□□ -0
CLK3-213ENST00000563842 JPH2Q9BR39 696 aaPredicted RBP15.04■□□□□ -0
CLK3-213ENST00000563842 COL25A1Q9BXS0 654 aaPredicted RBP15.04■□□□□ -0
CLK3-213ENST00000563842 NIFKQ9BYG3 293 aaKnown RBP15.04■□□□□ -0
CLK3-213ENST00000563842 TTYH1Q9H313 450 aaPredicted RBP15.04■□□□□ -0
CLK3-213ENST00000563842 VAV3Q9UKW4 847 aa15.04■□□□□ -0
CLK3-213ENST00000563842 SMC3Q9UQE7 1217 aa15.04■□□□□ -0
CLK3-213ENST00000563842 STXBP5LQ9Y2K9 1186 aa15.04■□□□□ -0
CLK3-213ENST00000563842 TLL1O43897 1013 aa15.03■□□□□ -0
CLK3-213ENST00000563842 C22orf31O95567 290 aa15.03■□□□□ -0
CLK3-213ENST00000563842 RABGGTBP53611 331 aa15.03■□□□□ -0
CLK3-213ENST00000563842 LPIN1Q14693 890 aa15.03■□□□□ -0
CLK3-213ENST00000563842 UGCGQ16739 394 aa15.03■□□□□ -0
CLK3-213ENST00000563842 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
CLK3-213ENST00000563842 NCAPH2Q6IBW4 605 aa15.03■□□□□ -0
CLK3-213ENST00000563842 EFCAB12Q6NXP0 572 aa15.03■□□□□ -0
CLK3-213ENST00000563842 KIAA0319LQ8IZA0 1049 aa15.03■□□□□ -0
CLK3-213ENST00000563842 ZBTB10Q96DT7 871 aa15.03■□□□□ -0
CLK3-213ENST00000563842 FTHL17Q9BXU8 183 aa15.03■□□□□ -0
CLK3-213ENST00000563842 NKX2-4Q9H2Z4 354 aa15.03■□□□□ -0
CLK3-213ENST00000563842 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
CLK3-213ENST00000563842 PPME1Q9Y570 386 aa15.03■□□□□ -0
CLK3-213ENST00000563842 DDX11L8A8MPP1 907 aa15.02■□□□□ -0
CLK3-213ENST00000563842 H3BQV1 296 aa15.02■□□□□ -0
CLK3-213ENST00000563842 EML1O00423 815 aa15.02■□□□□ -0
CLK3-213ENST00000563842 GJB5O95377 273 aa15.02■□□□□ -0
CLK3-213ENST00000563842 CD2BP2O95400 341 aaKnown RBP15.02■□□□□ -0
CLK3-213ENST00000563842 ATP2B1P20020 1258 aa15.02■□□□□ -0
CLK3-213ENST00000563842 U2AF2P26368 475 aaKnown RBP eCLIP15.02■□□□□ -0
CLK3-213ENST00000563842 GJB2P29033 226 aa15.02■□□□□ -0
CLK3-213ENST00000563842 MCM7P33993 719 aa15.02■□□□□ -0
CLK3-213ENST00000563842 DNM2P50570 870 aa15.02■□□□□ -0
CLK3-213ENST00000563842 DEFB103AP81534 67 aa15.02■□□□□ -0
CLK3-213ENST00000563842 CDC42EP1Q00587 391 aa15.02■□□□□ -0
CLK3-213ENST00000563842 TMEM62Q0P6H9 643 aa15.02■□□□□ -0
CLK3-213ENST00000563842 OTUD6AQ7L8S5 288 aa15.02■□□□□ -0
CLK3-213ENST00000563842 C4orf19Q8IY42 314 aa15.02■□□□□ -0
CLK3-213ENST00000563842 MYOCDQ8IZQ8 938 aa15.02■□□□□ -0
CLK3-213ENST00000563842 BANK1Q8NDB2 785 aa15.02■□□□□ -0
CLK3-213ENST00000563842 NEK9Q8TD19 979 aa15.02■□□□□ -0
CLK3-213ENST00000563842 CDX2Q99626 313 aaPredicted RBP15.02■□□□□ -0
CLK3-213ENST00000563842 RAD9AQ99638 391 aa15.02■□□□□ -0
CLK3-213ENST00000563842 ZSWIM4Q9H7M6 989 aa15.02■□□□□ -0
CLK3-213ENST00000563842 TTC12Q9H892 705 aaPredicted RBP15.02■□□□□ -0
CLK3-213ENST00000563842 AKT3Q9Y243 479 aa15.02■□□□□ -0
CLK3-213ENST00000563842 YBX2Q9Y2T7 364 aaKnown RBP15.02■□□□□ -0
CLK3-213ENST00000563842 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 TXKP42681 527 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 CRYBB1P53674 252 aaPredicted RBP15.01□□□□□ -0.01
CLK3-213ENST00000563842 PAK2Q13177 524 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 TARBP2Q15633 366 aaKnown RBP15.01□□□□□ -0.01
CLK3-213ENST00000563842 TCTN1Q2MV58 587 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 TTC38Q5R3I4 469 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 MTMR9Q96QG7 549 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 GAS2L1Q99501 681 aaPredicted RBP15.01□□□□□ -0.01
CLK3-213ENST00000563842 SUGCTQ9HAC7 445 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
CLK3-213ENST00000563842 GINS2Q9Y248 185 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 INSL6Q9Y581 213 aa15.01□□□□□ -0.01
CLK3-213ENST00000563842 GPR182O15218 404 aa15□□□□□ -0.01
CLK3-213ENST00000563842 RPS6KA5O75582 802 aa15□□□□□ -0.01
CLK3-213ENST00000563842 CA3P07451 260 aa15□□□□□ -0.01
CLK3-213ENST00000563842 CD52P31358 61 aa15□□□□□ -0.01
CLK3-213ENST00000563842 CLCN3P51790 818 aa15□□□□□ -0.01
CLK3-213ENST00000563842 SPIRE1Q08AE8 756 aa15□□□□□ -0.01
CLK3-213ENST00000563842 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
CLK3-213ENST00000563842 ZNF174Q15697 407 aa15□□□□□ -0.01
CLK3-213ENST00000563842 MCTP1Q6DN14 999 aa15□□□□□ -0.01
CLK3-213ENST00000563842 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15□□□□□ -0.01
CLK3-213ENST00000563842 TOP1MTQ969P6 601 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms