RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 TOP6BLQ8N6T0 577 aa7□□□□□ -1.29
TCF4-220ENST00000563824 ATXN2LQ8WWM7 1075 aaKnown RBP7□□□□□ -1.29
TCF4-220ENST00000563824 WFDC12Q8WWY7 111 aa7□□□□□ -1.29
TCF4-220ENST00000563824 NINJ1Q92982 152 aa7□□□□□ -1.29
TCF4-220ENST00000563824 SCARF2Q96GP6 870 aaPredicted RBP7□□□□□ -1.29
TCF4-220ENST00000563824 ISCA1Q9BUE6 129 aa7□□□□□ -1.29
TCF4-220ENST00000563824 LGR4Q9BXB1 951 aa7□□□□□ -1.29
TCF4-220ENST00000563824 KCNF1Q9H3M0 494 aa7□□□□□ -1.29
TCF4-220ENST00000563824 NCOA5Q9HCD5 579 aaKnown RBP7□□□□□ -1.29
TCF4-220ENST00000563824 GP6Q9HCN6 339 aa7□□□□□ -1.29
TCF4-220ENST00000563824 ZMYND8Q9ULU4 1186 aaPredicted RBP7□□□□□ -1.29
TCF4-220ENST00000563824 AKT3Q9Y243 479 aa7□□□□□ -1.29
TCF4-220ENST00000563824 CNTNAP5Q8WYK1 1306 aa7□□□□□ -1.29
TCF4-220ENST00000563824 OTOFQ9HC10 1997 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 MGAMO43451 1857 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 KRBA1A5PL33 1030 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 BTBD19C9JJ37 291 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 PRODHO43272 600 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 RAB11FIP3O75154 756 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 BMP3P12645 472 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 NOS3P29474 1203 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 CDK5R2Q13319 367 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 CBX2Q14781 532 aaPredicted RBP6.99□□□□□ -1.29
TCF4-220ENST00000563824 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 CT47A1Q5JQC4 288 aaPredicted RBP6.99□□□□□ -1.29
TCF4-220ENST00000563824 SCUBE1Q8IWY4 988 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 PLBD2Q8NHP8 589 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.99□□□□□ -1.29
TCF4-220ENST00000563824 GIMAP7Q8NHV1 300 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 RIN3Q8TB24 985 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 KISS1RQ969F8 398 aaPredicted RBP6.99□□□□□ -1.29
TCF4-220ENST00000563824 FAM89AQ96GI7 184 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 FAM46AQ96IP4 442 aaKnown RBP6.99□□□□□ -1.29
TCF4-220ENST00000563824 DEFB118Q96PH6 123 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 CDC5LQ99459 802 aaKnown RBP6.99□□□□□ -1.29
TCF4-220ENST00000563824 DSCC1Q9BVC3 393 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 SEMA6BQ9H3T3 888 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 C11orf49Q9H6J7 331 aa6.99□□□□□ -1.29
TCF4-220ENST00000563824 NOL6Q9H6R4 1146 aaKnown RBP6.99□□□□□ -1.29
TCF4-220ENST00000563824 COL4A1P02462 1669 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 PLD2O14939 933 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 SHOXO15266 292 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 DYNC1LI2O43237 492 aaPredicted RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 KCNH1O95259 989 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 FGFR1P11362 822 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 PABPC1P11940 636 aaKnown RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 MYCLP1P12525 358 aaPredicted RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 MAP4P27816 1152 aaKnown RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 PRKCZQ05513 592 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 PPATQ06203 517 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 PPIL2Q13356 520 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 VGLL4Q14135 290 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 PPP2R5DQ14738 602 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 NFKBIBQ15653 356 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 PAOXQ6QHF9 649 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 NSMFQ6X4W1 530 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 TRIM59Q8IWR1 403 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 BTN2A2Q8WVV5 523 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 BRF1Q92994 677 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 MYRFLQ96LU7 910 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 UBL7Q96S82 380 aaPredicted RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 PARK7Q99497 189 aaKnown RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 LBHD1Q9BQE6 289 aaPredicted RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 IER2Q9BTL4 223 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 BSDC1Q9NW68 430 aaPredicted RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 MIS18AQ9NYP9 233 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
TCF4-220ENST00000563824 SFMBT1Q9UHJ3 866 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 FZD1Q9UP38 647 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 ZSWIM8A7E2V4 1837 aa6.98□□□□□ -1.29
TCF4-220ENST00000563824 TBX1O43435 398 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 PDE8AO60658 829 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 FOSL2P15408 326 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 KCNJ6P48051 423 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 CCT4P50991 539 aaKnown RBP6.97□□□□□ -1.29
TCF4-220ENST00000563824 SMAD3P84022 425 aaKnown RBP6.97□□□□□ -1.29
TCF4-220ENST00000563824 DCTN1Q14203 1278 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 PLA2G4EQ3MJ16 856 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 FNDC3BQ53EP0 1204 aaKnown RBP6.97□□□□□ -1.29
TCF4-220ENST00000563824 CHAC2Q8WUX2 184 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 EZH1Q92800 747 aaPredicted RBP6.97□□□□□ -1.29
TCF4-220ENST00000563824 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 ZDHHC15Q96MV8 337 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 PSMG3-AS1Q96PY0 264 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 MRPL4Q9BYD3 311 aaKnown RBP6.97□□□□□ -1.29
TCF4-220ENST00000563824 ASCC2Q9H1I8 757 aaPredicted RBP6.97□□□□□ -1.29
TCF4-220ENST00000563824 VEZTQ9HBM0 779 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 GFOD1Q9NXC2 390 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 EMC9Q9Y3B6 208 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 FHOD1Q9Y613 1164 aa6.97□□□□□ -1.29
TCF4-220ENST00000563824 CACNA1AO00555 2505 aa6.96□□□□□ -1.29
TCF4-220ENST00000563824 PDHXO00330 501 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 MSTNO14793 375 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 RFPL3O75679 317 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 U2AF1L5P0DN76 240 aaPredicted RBP6.96□□□□□ -1.3
TCF4-220ENST00000563824 SYN1P17600 705 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 EIF2S2P20042 333 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms