RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 XKR3Q5GH77 459 aa24.33■■□□□ 1.49
LINC01960-201ENST00000563759 GJC2Q5T442 439 aaPredicted RBP24.33■■□□□ 1.49
LINC01960-201ENST00000563759 DHTKD1Q96HY7 919 aaPredicted RBP24.33■■□□□ 1.49
LINC01960-201ENST00000563759 CEP170P1Q96L14 293 aa24.33■■□□□ 1.49
LINC01960-201ENST00000563759 FANCLQ9NW38 375 aa24.33■■□□□ 1.49
LINC01960-201ENST00000563759 OATP04181 439 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 STAT5BP51692 787 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 ARHGAP1Q07960 439 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 LAMC2Q13753 1193 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 OLFML2BQ68BL8 750 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 TRIM47Q96LD4 638 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 PARVGQ9HBI0 331 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 POLD4Q9HCU8 107 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 AP5Z1O43299 807 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 HIP1RO75146 1068 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 TRPA1O75762 1119 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 ADCY5O95622 1261 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 CCDC144BQ3MJ40 725 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 SPATA1Q5VX52 437 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 GUF1Q8N442 669 aaKnown RBP24.32■■□□□ 1.48
LINC01960-201ENST00000563759 AFAP1L1Q8TED9 768 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 GLG1Q92896 1179 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 TRIM5Q9C035 493 aa24.32■■□□□ 1.48
LINC01960-201ENST00000563759 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.31■■□□□ 1.48
LINC01960-201ENST00000563759 PTGS1P23219 599 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 SP3Q02447 781 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 CCDC173Q0VFZ6 552 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 KIF22Q14807 665 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 LRRC41Q15345 812 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 MAEAQ7L5Y9 396 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 MYOCDQ8IZQ8 938 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 MYCT1Q8N699 235 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 GLIS3Q8NEA6 775 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 PCYT2Q99447 389 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 HSD3B7Q9H2F3 369 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 MRPL44Q9H9J2 332 aaKnown RBP24.31■■□□□ 1.48
LINC01960-201ENST00000563759 PCDHA2Q9Y5H9 948 aa24.31■■□□□ 1.48
LINC01960-201ENST00000563759 BICDL2A1A5D9 508 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 TRIM49BA6NDI0 452 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 SFI1A8K8P3 1242 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 STBD1O95210 358 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 CYP2C19P33261 490 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 DUSP28Q4G0W2 176 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 HSP90AA4PQ58FG1 418 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 P2RX5Q93086 422 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 TIPINQ9BVW5 301 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 CYP26B1Q9NR63 512 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 OLFML3Q9NRN5 406 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 SEL1LQ9UBV2 794 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 EMSYQ7Z589 1322 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 KIF20AO95235 890 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 ATP4AP20648 1035 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 IRF5Q13568 498 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 MTERF2Q49AM1 385 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 IQSEC1Q6DN90 963 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 SARM1Q6SZW1 724 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 TRIM50Q86XT4 487 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 CFHR5Q9BXR6 569 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 FGFBP2Q9BYJ0 223 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 RNF186Q9NXI6 227 aa24.3■■□□□ 1.48
LINC01960-201ENST00000563759 NKRFO15226 690 aaKnown RBP eCLIP24.29■■□□□ 1.48
LINC01960-201ENST00000563759 LGR5O75473 907 aa24.29■■□□□ 1.48
LINC01960-201ENST00000563759 SMPD1P17405 629 aa24.29■■□□□ 1.48
LINC01960-201ENST00000563759 CCNE1P24864 410 aa24.29■■□□□ 1.48
LINC01960-201ENST00000563759 ZNF131P52739 623 aa24.29■■□□□ 1.48
LINC01960-201ENST00000563759 PPTC7Q8NI37 304 aa24.29■■□□□ 1.48
LINC01960-201ENST00000563759 EMID1Q96A84 441 aaPredicted RBP24.29■■□□□ 1.48
LINC01960-201ENST00000563759 FAM167AQ96KS9 214 aa24.29■■□□□ 1.48
LINC01960-201ENST00000563759 DRC1Q96MC2 740 aa24.29■■□□□ 1.48
LINC01960-201ENST00000563759 SAMSN1Q9NSI8 373 aaKnown RBP24.29■■□□□ 1.48
LINC01960-201ENST00000563759 ATP1A3P13637 1013 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 PMS1P54277 932 aaKnown RBP24.28■■□□□ 1.48
LINC01960-201ENST00000563759 TNFAIP2Q03169 654 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 PRAMEF19Q5SWL8 479 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 ODR4Q5SWX8 454 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 DGAT1O75907 488 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 MARK3P27448 753 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 MAPK7Q13164 816 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 FAM178BQ8IXR5 827 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 DAW1Q8N136 415 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 OR6J1Q8NGC5 347 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 KAT6AQ92794 2004 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 NRBP2Q9NSY0 501 aa24.28■■□□□ 1.48
LINC01960-201ENST00000563759 LARSQ9P2J5 1176 aaKnown RBP24.28■■□□□ 1.48
LINC01960-201ENST00000563759 GCNT3O95395 438 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 XRCC5P13010 732 aaKnown RBP24.27■■□□□ 1.48
LINC01960-201ENST00000563759 CDK11BP21127 795 aaKnown RBP24.27■■□□□ 1.48
LINC01960-201ENST00000563759 FLT3LGP49771 235 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 CASP5P51878 434 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 FAM102BQ5T8I3 360 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 TTI2Q6NXR4 508 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 PLPPR4Q7Z2D5 763 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 AFG1LQ8WV93 481 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 SMARCAD1Q9H4L7 1026 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 ATP6V0A4Q9HBG4 840 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 GABRQQ9UN88 632 aa24.27■■□□□ 1.48
LINC01960-201ENST00000563759 ZNF18P17022 549 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 SLC26A2P50443 739 aa24.26■■□□□ 1.47
LINC01960-201ENST00000563759 POLGP54098 1239 aaPredicted RBP24.26■■□□□ 1.47
LINC01960-201ENST00000563759 PRKCZQ05513 592 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms