RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 CCDC13Q8IYE1 715 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 UBL4BQ8N7F7 174 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 TSEN2Q8NCE0 465 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 HDAC7Q8WUI4 952 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 NAP1L3Q99457 506 aaPredicted RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 SLC8A1P32418 973 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 SH2D3AQ9BRG2 576 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 IMPG2Q9BZV3 1241 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 ECE2O60344 883 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
RNF40-204ENST00000563683 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
RNF40-204ENST00000563683 WLSQ5T9L3 541 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 PROM2Q8N271 834 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 SH2D3CQ8N5H7 860 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 MYCBPAPQ8TBZ2 947 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 MIEF2Q96C03 454 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 ADAMTS7Q9UKP4 1686 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 E7EVH7 732 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 RASSF9O75901 435 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 GUCY1A3Q02108 690 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 NLRX1Q86UT6 975 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 CEP57Q86XR8 500 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 FLAD1Q8NFF5 587 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 MAGEC3Q8TD91 643 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 ATP6V1G3Q96LB4 118 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 SLC40A1Q9NP59 571 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 CEP72Q9P209 647 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 BZW2Q9Y6E2 419 aaKnown RBP11.35□□□□□ -0.59
RNF40-204ENST00000563683 KIF1AQ12756 1690 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 SLURP2P0DP57 97 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 TNNI1P19237 187 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 FUT2Q10981 343 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 MESDQ14696 234 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 CRYMQ14894 314 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 IL17AQ16552 155 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 WDR44Q5JSH3 913 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 WHAMMQ8TF30 809 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 NACC1Q96RE7 527 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 SYNCQ9H7C4 482 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 KCNK9Q9NPC2 374 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 USTQ9Y2C2 406 aa11.35□□□□□ -0.59
RNF40-204ENST00000563683 A0A1W2PQJ5 194 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 ZBED4O75132 1171 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 KRT14P02533 472 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 NR3C1P04150 777 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 ACTN1P12814 892 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 POLD1P28340 1107 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 GBP2P32456 591 aaPredicted RBP11.34□□□□□ -0.59
RNF40-204ENST00000563683 VPS41P49754 854 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 GRB10Q13322 594 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 KNOP1Q1ED39 458 aaKnown RBP11.34□□□□□ -0.59
RNF40-204ENST00000563683 IQCKQ8N0W5 287 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 MREGQ8N565 214 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 MS4A14Q96JA4 679 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 GYS1P13807 737 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 CHRNA5P30532 468 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 AP3B2Q13367 1082 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 FIGNQ5HY92 759 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 ARHGEF16Q5VV41 709 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 ARMC9Q7Z3E5 817 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 KIFAP3Q92845 792 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 DYDC2Q96IM9 177 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 IFT74Q96LB3 600 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 PICK1Q9NRD5 415 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 ASIC3Q9UHC3 531 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 SCAF8Q9UPN6 1271 aaKnown RBP11.34□□□□□ -0.59
RNF40-204ENST00000563683 MYO5AQ9Y4I1 1855 aaKnown RBP11.34□□□□□ -0.59
RNF40-204ENST00000563683 HGSO14964 777 aaPredicted RBP11.34□□□□□ -0.59
RNF40-204ENST00000563683 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
RNF40-204ENST00000563683 MYL7Q01449 175 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 DCAF4Q8WV16 495 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 P3H4Q92791 437 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
RNF40-204ENST00000563683 GOLGA8IPA6NC78 632 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 GOLGA8JA6NMD2 632 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 NDUFB10O96000 172 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 FERP16591 822 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 IRF2BP1Q8IU81 584 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.33□□□□□ -0.6
RNF40-204ENST00000563683 MRRFQ96E11 262 aaKnown RBP11.33□□□□□ -0.6
RNF40-204ENST00000563683 CEP63Q96MT8 703 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 UBE2TQ9NPD8 197 aaPredicted RBP11.33□□□□□ -0.6
RNF40-204ENST00000563683 EHD2Q9NZN4 543 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 EXOC7Q9UPT5 735 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 A0A1W2PRG0 241 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 ECM29Q5VYK3 1845 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 PDXDC1Q6P996 788 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 HOOK3Q86VS8 718 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 DAGLBQ8NCG7 672 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
RNF40-204ENST00000563683 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms