RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 NCAPH2Q6IBW4 605 aa22.78■■□□□ 1.24
CMTM3-206ENST00000563672 LINC01465Q8N7H1 131 aa22.78■■□□□ 1.24
CMTM3-206ENST00000563672 SEPT8Q92599 483 aa22.78■■□□□ 1.24
CMTM3-206ENST00000563672 PBX4Q9BYU1 374 aa22.78■■□□□ 1.24
CMTM3-206ENST00000563672 WRAP73Q9P2S5 460 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-206ENST00000563672 NOL7Q9UMY1 257 aaKnown RBP22.78■■□□□ 1.24
CMTM3-206ENST00000563672 MYH9P35579 1960 aaKnown RBP22.78■■□□□ 1.24
CMTM3-206ENST00000563672 H3BQV1 296 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 DKC1O60832 514 aaKnown RBP eCLIP22.77■■□□□ 1.241e-9■■■□□ 17.2
CMTM3-206ENST00000563672 EFCAB14O75071 495 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 DNAJB2P25686 324 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 PBX2P40425 430 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 WDR5P61964 334 aaKnown RBP22.77■■□□□ 1.24
CMTM3-206ENST00000563672 LPIN1Q14693 890 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 FBXO47Q5MNV8 452 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 ANO5Q75V66 913 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 C4orf32Q8N8J7 132 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 SNX21Q969T3 373 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 CEP89Q96ST8 783 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 SLC9A7Q96T83 725 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 RGL1Q9NZL6 768 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 TRPV2Q9Y5S1 764 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 SQORQ9Y6N5 450 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 KDM3AQ9Y4C1 1321 aa22.77■■□□□ 1.24
CMTM3-206ENST00000563672 DDX11L8A8MPP1 907 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 K7ELQ4 463 aaPredicted RBP22.76■■□□□ 1.23
CMTM3-206ENST00000563672 GHRP10912 638 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 TMEM62Q0P6H9 643 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 NBR1Q14596 966 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 MCTP1Q6DN14 999 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 Q7L0L9 218 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 C4orf19Q8IY42 314 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 DEFB123Q8N688 67 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 INTS4Q96HW7 963 aaKnown RBP22.76■■□□□ 1.23
CMTM3-206ENST00000563672 DYDC2Q96IM9 177 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 HSD17B14Q9BPX1 270 aa22.76■■□□□ 1.23
CMTM3-206ENST00000563672 IFIH1Q9BYX4 1025 aaKnown RBP22.76■■□□□ 1.23
CMTM3-206ENST00000563672 CELF4Q9BZC1 486 aaKnown RBP22.76■■□□□ 1.23
CMTM3-206ENST00000563672 SEPT9Q9UHD8 586 aaPredicted RBP22.76■■□□□ 1.23
CMTM3-206ENST00000563672 TMEM265A0A087WTH1 108 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 TMEM150BA6NC51 233 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 SLITRK3O94933 977 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 OR52Z1P0C646 297 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 KCNJ6P48051 423 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 EFCAB12Q6NXP0 572 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 METTL13Q8N6R0 699 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 APBB2Q92870 758 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 EIF2AK1Q9BQI3 630 aaKnown RBP22.75■■□□□ 1.23
CMTM3-206ENST00000563672 LXNQ9BS40 222 aa22.75■■□□□ 1.23
CMTM3-206ENST00000563672 WDR81Q562E7 1941 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 M0QZ92 97 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 RABGGTBP53611 331 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 DEFB103AP81534 67 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 TBC1D8BQ0IIM8 1120 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 RAB30Q15771 203 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 MTERF2Q49AM1 385 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 TSHZ1Q6ZSZ6 1077 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 HERC6Q8IVU3 1022 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 USP38Q8NB14 1042 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 TIFAQ96CG3 184 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 TTYH1Q9H313 450 aaPredicted RBP22.74■■□□□ 1.23
CMTM3-206ENST00000563672 SEMA6BQ9H3T3 888 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 ZSWIM4Q9H7M6 989 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 AGO3Q9H9G7 860 aaKnown RBP22.74■■□□□ 1.23
CMTM3-206ENST00000563672 PCDHB6Q9Y5E3 794 aa22.74■■□□□ 1.23
CMTM3-206ENST00000563672 IGKV6-21A0A0C4DH24 114 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 LYPLA2O95372 231 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 TMOD1P28289 359 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 CLCN3P51790 818 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 CYP4A11Q02928 519 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 CTTNQ14247 550 aaKnown RBP22.73■■□□□ 1.23
CMTM3-206ENST00000563672 RILPL1Q5EBL4 403 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 ZNF697Q5TEC3 545 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 SH2D3AQ9BRG2 576 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 CDHR5Q9HBB8 845 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 MTMR10Q9NXD2 777 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 MSRAQ9UJ68 235 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 YBX2Q9Y2T7 364 aaKnown RBP22.73■■□□□ 1.23
CMTM3-206ENST00000563672 PCDHA11Q9Y5I1 949 aa22.73■■□□□ 1.23
CMTM3-206ENST00000563672 POTEMA6NI47 508 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 GPR32O75388 356 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 PLA2G4FQ68DD2 849 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.72■■□□□ 1.23
CMTM3-206ENST00000563672 TPH2Q8IWU9 490 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 LRRC71Q8N4P6 559 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 NEK9Q8TD19 979 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 SUGCTQ9HAC7 445 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 CYP26B1Q9NR63 512 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.72■■□□□ 1.23
CMTM3-206ENST00000563672 PPME1Q9Y570 386 aa22.72■■□□□ 1.23
CMTM3-206ENST00000563672 MAFO75444 373 aaPredicted RBP22.71■■□□□ 1.23
CMTM3-206ENST00000563672 VTNP04004 478 aa22.71■■□□□ 1.23
CMTM3-206ENST00000563672 PDCP20941 246 aa22.71■■□□□ 1.23
CMTM3-206ENST00000563672 CD52P31358 61 aa22.71■■□□□ 1.23
CMTM3-206ENST00000563672 YWHABP31946 246 aaKnown RBP22.71■■□□□ 1.23
CMTM3-206ENST00000563672 TECP42680 631 aa22.71■■□□□ 1.23
CMTM3-206ENST00000563672 NPEPPSP55786 919 aa22.71■■□□□ 1.23
CMTM3-206ENST00000563672 PTGDRQ13258 359 aa22.71■■□□□ 1.23
CMTM3-206ENST00000563672 ZNF710Q8N1W2 664 aa22.71■■□□□ 1.23
CMTM3-206ENST00000563672 ZNF579Q8NAF0 562 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms