RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 BPIFA3Q9BQP9 254 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 SEPT9Q9UHD8 586 aaPredicted RBP11.3□□□□□ -0.6
SMG1-208ENST00000563448 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
SMG1-208ENST00000563448 HOXD10P28358 340 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
SMG1-208ENST00000563448 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 PLPPR4Q7Z2D5 763 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 LUZP1Q86V48 1076 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 DHX40Q8IX18 779 aaKnown RBP11.29□□□□□ -0.6
SMG1-208ENST00000563448 KIAA0895Q8NCT3 520 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 LENG1Q96BZ8 264 aaPredicted RBP11.29□□□□□ -0.6
SMG1-208ENST00000563448 NAT10Q9H0A0 1025 aaKnown RBP11.29□□□□□ -0.6
SMG1-208ENST00000563448 AZI2Q9H6S1 392 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 NRBP1Q9UHY1 535 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 PCDHA2Q9Y5H9 948 aa11.29□□□□□ -0.6
SMG1-208ENST00000563448 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
SMG1-208ENST00000563448 GNRH1P01148 92 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 LGALS2P05162 132 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 MMP3P08254 477 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 GUCY2CP25092 1073 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 PRCPP42785 496 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 MAPK7Q13164 816 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 PSMD2Q13200 908 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
SMG1-208ENST00000563448 CEP170P1Q96L14 293 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
SMG1-208ENST00000563448 MED15Q96RN5 788 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 NIFKQ9BYG3 293 aaKnown RBP11.28□□□□□ -0.6
SMG1-208ENST00000563448 SLC39A2Q9NP94 309 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 CYP26B1Q9NR63 512 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 SFI1A8K8P3 1242 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 DYNC1LI2O43237 492 aaPredicted RBP11.28□□□□□ -0.6
SMG1-208ENST00000563448 HOXD8P13378 290 aaPredicted RBP11.28□□□□□ -0.6
SMG1-208ENST00000563448 AKR1A1P14550 325 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 ELNP15502 786 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 MRE11P49959 708 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
SMG1-208ENST00000563448 PLCB4Q15147 1175 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 MTERF2Q49AM1 385 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 TLK2Q86UE8 772 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 DAW1Q8N136 415 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 AOPEPQ8N6M6 819 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 GLIS3Q8NEA6 775 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 GLG1Q92896 1179 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 FGFBP2Q9BYJ0 223 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 ZHX3Q9H4I2 956 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 SMARCAD1Q9H4L7 1026 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 NRBP2Q9NSY0 501 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 TBC1D7Q9P0N9 293 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 ODF2LQ9ULJ1 636 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 MAPK8IP1Q9UQF2 711 aa11.28□□□□□ -0.6
SMG1-208ENST00000563448 ADCY3O60266 1144 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 HIP1RO75146 1068 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 PPFIA4O75335 1185 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 TBCAO75347 108 aaKnown RBP11.27□□□□□ -0.61
SMG1-208ENST00000563448 MARK3P27448 753 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 ZNF131P52739 623 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.61
SMG1-208ENST00000563448 NCAPHQ15003 741 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 TARBP2Q15633 366 aaKnown RBP11.27□□□□□ -0.61
SMG1-208ENST00000563448 COBLL1Q53SF7 1204 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
SMG1-208ENST00000563448 CT47A1Q5JQC4 288 aaPredicted RBP11.27□□□□□ -0.61
SMG1-208ENST00000563448 FAM26FQ5R3K3 315 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 MAEAQ7L5Y9 396 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 SFR1Q86XK3 245 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.61
SMG1-208ENST00000563448 C16orf70Q9BSU1 422 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 Q9Y3F1 56 aa11.27□□□□□ -0.61
SMG1-208ENST00000563448 A6NJR5 290 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 FAM13AO94988 1023 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 ZNF286BP0CG31 522 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 GAP43P17677 238 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 ERCC5P28715 1186 aaPredicted RBP11.26□□□□□ -0.61
SMG1-208ENST00000563448 SLC26A2P50443 739 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 LRRC41Q15345 812 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 UVSSAQ2YD98 709 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 KLHL10Q6JEL2 608 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 DNAJC5GQ8N7S2 189 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 ATP8B4Q8TF62 1192 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 FAM167AQ96KS9 214 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 BEGAINQ9BUH8 593 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
SMG1-208ENST00000563448 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 WBP1LQ9NX94 342 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 CTNND2Q9UQB3 1225 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 COL4A3BPQ9Y5P4 624 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 SCN10AQ9Y5Y9 1956 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 ZBTB42B2RXF5 422 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 IKBKBO14920 756 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 DGAT1O75907 488 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms