RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ASTN1O14525 1302 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 PPP1R12BO60237 982 aaPredicted RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 CEP104O60308 925 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 TBCAO75347 108 aaKnown RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 AKAP3O75969 853 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 UBE4BO95155 1302 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 KRT14P02533 472 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 MUTP22033 750 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 STAT1P42224 750 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 PSMC6P62333 389 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 FKBP1AP62942 108 aaKnown RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 HDLBPQ00341 1268 aaKnown RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 MTMR3Q13615 1198 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 ENOX2Q16206 610 aaKnown RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 SLC27A3Q5K4L6 730 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 TMEM179Q6ZVK1 233 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 RBM46Q8TBY0 533 aaKnown RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 SLC35C1Q96A29 364 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 IDI2Q9BXS1 227 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 DNAJC18Q9H819 358 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 TTC7AQ9ULT0 858 aaPredicted RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 ESYT3A0FGR9 886 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 ZSCAN5CA6NGD5 496 aaPredicted RBP14.28□□□□□ -0.12
USB1-207ENST00000563149 GOLGA6L10A6NI86 522 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 NR1D1P20393 614 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 PSMC2P35998 433 aaKnown RBP14.28□□□□□ -0.12
USB1-207ENST00000563149 CRKP46108 304 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 DNA2P51530 1060 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 DDR1Q08345 913 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 TATDN1Q6P1N9 297 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 MICALCLQ6ZW33 695 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 PEX26Q7Z412 305 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 MAATS1Q7Z4T9 603 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 KLHL7Q8IXQ5 586 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 CCDC26Q8TAB7 109 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
USB1-207ENST00000563149 EPN3Q9H201 632 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 TMBIM4Q9HC24 238 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 TUFT1Q9NNX1 390 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 VAV3Q9UKW4 847 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 RABGAP1Q9Y3P9 1069 aa14.28□□□□□ -0.12
USB1-207ENST00000563149 NDUFAB1O14561 156 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 MSH4O15457 936 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 GCNT3O95395 438 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 CCDC172P0C7W6 258 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 SCNN1DP51172 638 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 GUCY2FP51841 1108 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 ERVK-9P63128 1117 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 CLUL1Q15846 466 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 PPP2R5EQ16537 467 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 DCAF17Q5H9S7 520 aaPredicted RBP14.27□□□□□ -0.12
USB1-207ENST00000563149 FAM182BQ5T319 152 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 TCERG1LQ5VWI1 586 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 METTL13Q8N6R0 699 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 BORCS6Q96GS4 357 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 EIF2AK1Q9BQI3 630 aaKnown RBP14.27□□□□□ -0.12
USB1-207ENST00000563149 GCNT4Q9P109 453 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 SEL1LQ9UBV2 794 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 GGA2Q9UJY4 613 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 PLAAQ9Y263 795 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 SIPA1L1O43166 1804 aa14.27□□□□□ -0.12
USB1-207ENST00000563149 FAM86B1E9PN63 330 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 F5H6K3 240 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 G3V3G9 751 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 PIK3CDO00329 1044 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 MEIS1O00470 390 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 FAM86B2P0C5J1 330 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 LMNB1P20700 586 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 ALDH1B1P30837 517 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 ICA1Q05084 483 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 KLRC3Q07444 240 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 NFIAQ12857 509 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 PDCLQ13371 301 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 BIRC3Q13489 604 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 HLTFQ14527 1009 aaKnown RBP eCLIP14.27□□□□□ -0.13
USB1-207ENST00000563149 SPDYCQ5MJ68 293 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 DCAF8Q5TAQ9 597 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 RUFY4Q6ZNE9 571 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 STXBP4Q6ZWJ1 553 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 PODNQ7Z5L7 613 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 RNPC3Q96LT9 517 aaKnown RBP14.27□□□□□ -0.13
USB1-207ENST00000563149 BHMT2Q9H2M3 363 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 AMFRQ9UKV5 643 aa14.27□□□□□ -0.13
USB1-207ENST00000563149 NOC2LQ9Y3T9 749 aaKnown RBP14.27□□□□□ -0.13
USB1-207ENST00000563149 NCANO14594 1321 aa14.26□□□□□ -0.13
USB1-207ENST00000563149 TMCO5BA8MYB1 307 aa14.26□□□□□ -0.13
USB1-207ENST00000563149 DDX3XO00571 662 aaKnown RBP eCLIP14.26□□□□□ -0.132e-15■■■■■ 27.4
USB1-207ENST00000563149 SART1O43290 800 aaKnown RBP14.26□□□□□ -0.13
USB1-207ENST00000563149 TGFB1I1O43294 461 aa14.26□□□□□ -0.13
USB1-207ENST00000563149 PPP1R37O75864 691 aa14.26□□□□□ -0.13
USB1-207ENST00000563149 NPR1P16066 1061 aa14.26□□□□□ -0.13
USB1-207ENST00000563149 ECHS1P30084 290 aa14.26□□□□□ -0.13
USB1-207ENST00000563149 LSP1P33241 339 aa14.26□□□□□ -0.13
USB1-207ENST00000563149 MDH1P40925 334 aaKnown RBP14.26□□□□□ -0.13
USB1-207ENST00000563149 RNASE9P60153 205 aaKnown RBP14.26□□□□□ -0.13
USB1-207ENST00000563149 KCTD16Q68DU8 428 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms