RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZNF20P17024 532 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 RBM25P49756 843 aaKnown RBP6.58□□□□□ -1.36
SMG1-206ENST00000562668 SPIRE1Q08AE8 756 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 IFRD2Q12894 506 aaPredicted RBP6.58□□□□□ -1.36
SMG1-206ENST00000562668 TUSC3Q13454 348 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 CPZQ66K79 652 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 NSMFQ6X4W1 530 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 KLHL36Q8N4N3 616 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 DTX3Q8N9I9 347 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 ZNF669Q96BR6 464 aaPredicted RBP6.58□□□□□ -1.36
SMG1-206ENST00000562668 C1QTNF3Q9BXJ4 246 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 PCGF6Q9BYE7 350 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 TRIM55Q9BYV6 548 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 STRCP1A6NGW2 1772 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 COL6A1P12109 1028 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 HABP4Q5JVS0 413 aaKnown RBP6.57□□□□□ -1.36
SMG1-206ENST00000562668 IFNL3Q8IZI9 196 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 THEMISQ8N1K5 641 aaPredicted RBP6.57□□□□□ -1.36
SMG1-206ENST00000562668 CLEC4DQ8WXI8 215 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 IGSF5Q9NSI5 407 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 PPP4R1LQ9P1A2 415 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 SCAF11Q99590 1463 aaKnown RBP6.57□□□□□ -1.36
SMG1-206ENST00000562668 CCDC144AA2RUR9 1427 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 RIMS2Q9UQ26 1411 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 SETBP1Q9Y6X0 1596 aa6.57□□□□□ -1.36
SMG1-206ENST00000562668 NRXN1Q9ULB1 1477 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 BLACEA4D250 179 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 C1QTNF3-AMACRE9PGA6 284 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 LTFP02788 710 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 SOD2P04179 222 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 COL6A2P12110 1019 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 FAHP16930 419 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 PAN2Q504Q3 1202 aaKnown RBP6.56□□□□□ -1.36
SMG1-206ENST00000562668 YOD1Q5VVQ6 348 aaPredicted RBP6.56□□□□□ -1.36
SMG1-206ENST00000562668 DPH6Q7L8W6 267 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 LIMS2Q7Z4I7 341 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 RBM12BQ8IXT5 1001 aaKnown RBP6.56□□□□□ -1.36
SMG1-206ENST00000562668 KBTBD2Q8IY47 623 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 CHST13Q8NET6 341 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 IGDCC4Q8TDY8 1250 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 KCNJ15Q99712 375 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 BARX1Q9HBU1 254 aaPredicted RBP6.56□□□□□ -1.36
SMG1-206ENST00000562668 LTBP4Q8N2S1 1624 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 NPHP4O75161 1426 aaPredicted RBP6.56□□□□□ -1.36
SMG1-206ENST00000562668 ADAMTS13Q76LX8 1427 aa6.56□□□□□ -1.36
SMG1-206ENST00000562668 FAM47E-STBD1D6RA91 191 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 NKRFO15226 690 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMG1-206ENST00000562668 TNFRSF1AP19438 455 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 EPHB4P54760 987 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 NFATC3Q12968 1075 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 SMAD2Q15796 467 aaKnown RBP6.55□□□□□ -1.36
SMG1-206ENST00000562668 PHF19Q5T6S3 580 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.55□□□□□ -1.36
SMG1-206ENST00000562668 CKAP2LQ8IYA6 745 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 DVL3Q92997 716 aaPredicted RBP6.55□□□□□ -1.36
SMG1-206ENST00000562668 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 PDGFDQ9GZP0 370 aaPredicted RBP6.55□□□□□ -1.36
SMG1-206ENST00000562668 ST6GALNAC2Q9UJ37 374 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 DSEQ9UL01 958 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 MSRB2Q9Y3D2 182 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 TELO2Q9Y4R8 837 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 PLEKHG1Q9ULL1 1385 aa6.55□□□□□ -1.36
SMG1-206ENST00000562668 MYOM2P54296 1465 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 MATN3O15232 486 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 STK10O94804 968 aaKnown RBP6.54□□□□□ -1.36
SMG1-206ENST00000562668 CHGBP05060 677 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 SKIDA1Q1XH10 827 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 CD276Q5ZPR3 534 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 ARHGEF18Q6ZSZ5 1173 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 KCTD1Q719H9 257 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 NUDT10Q8NFP7 164 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 SPATA9Q9BWV2 254 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 TMPRSS5Q9H3S3 457 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 IPPKQ9H8X2 491 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 ZFP69BQ9UJL9 534 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 ADAM29Q9UKF5 820 aa6.54□□□□□ -1.36
SMG1-206ENST00000562668 CHD2O14647 1828 aaKnown RBP6.54□□□□□ -1.36
SMG1-206ENST00000562668 DIP2AQ14689 1571 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 NWD1Q149M9 1564 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 NPEPPSL1A6NEC2 478 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 KLHL18O94889 574 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 FBXO21O94952 628 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 EPHA5P54756 1037 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 PPP2CBP62714 309 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 PPP2CAP67775 309 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 RALYLQ86SE5 291 aaKnown RBP6.53□□□□□ -1.36
SMG1-206ENST00000562668 CIR1Q86X95 450 aaPredicted RBP6.53□□□□□ -1.36
SMG1-206ENST00000562668 ASXL1Q8IXJ9 1541 aa6.53□□□□□ -1.36
SMG1-206ENST00000562668 XIRP1Q702N8 1843 aaKnown RBP6.53□□□□□ -1.36
SMG1-206ENST00000562668 RPGRIP1LQ68CZ1 1315 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 PIK3C2GO75747 1445 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 ALKQ9UM73 1620 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 ZNF839A8K0R7 811 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 U2SURPO15042 1029 aaKnown RBP6.52□□□□□ -1.37
SMG1-206ENST00000562668 GPR42O15529 346 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 KNG1P01042 644 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 CKMP06732 381 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 ZC3H6P61129 1189 aaKnown RBP6.52□□□□□ -1.37
SMG1-206ENST00000562668 ICAM4Q14773 271 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms