RNA–Protein interactions for RNA: ENST00000562648.2

FBXL16-205, Transcript of F-box and leucine rich repeat protein 16, human

TSL 1 (best)

Gene FBXL16, Length 2,531 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXL16-205	ENST00000562648	BTNL9	Q6UXG8	535 aa		32.44	■■■□□ 2.78
FBXL16-205	ENST00000562648	IFT81	Q8WYA0	676 aa		32.44	■■■□□ 2.78
FBXL16-205	ENST00000562648	POLR3C	Q9BUI4	534 aa	Predicted RBP	32.44	■■■□□ 2.78
FBXL16-205	ENST00000562648	SLITRK3	O94933	977 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	HEXIM1	O94992	359 aa	Known RBP	32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	SKIDA1	Q1XH10	827 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	HSD17B14	Q9BPX1	270 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	GCNT4	Q9P109	453 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	NAGPA	Q9UK23	515 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	ZMYM2	Q9UBW7	1377 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	TCP10L2	B9ZVM9	353 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	BMT2	Q1RMZ1	405 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	OTOP1	Q7RTM1	612 aa		32.43	■■■□□ 2.78
FBXL16-205	ENST00000562648	VGLL3	A8MV65	326 aa		32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	MYCT1	Q8N699	235 aa		32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	UTRN	P46939	3433 aa		32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	GOLGA6C	A6NDK9	693 aa		32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	CYP3A4	P08684	503 aa		32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	GOLGA6D	P0CG33	693 aa		32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	NOP2	P46087	812 aa	Known RBP	32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	GOLGA6A	Q9NYA3	693 aa		32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	WRAP73	Q9P2S5	460 aa	Predicted RBP	32.42	■■■□□ 2.78
FBXL16-205	ENST00000562648	PLSCR1	O15162	318 aa		32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	EPB41	P11171	864 aa	Known RBP	32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	ALKBH5	Q6P6C2	394 aa	Known RBP	32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	PROCA1	Q8NCQ7	364 aa	Predicted RBP	32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	CLRN2	A0PK11	232 aa		32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	KCNK3	O14649	394 aa		32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	STAT2	P52630	851 aa		32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	FKBP1A	P62942	108 aa	Known RBP	32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	ZYX	Q15942	572 aa	Known RBP	32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	LRCH2	Q5VUJ6	765 aa		32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	MCTP2	Q6DN12	878 aa		32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	ARL8A	Q96BM9	186 aa		32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	CWC15	Q9P013	229 aa	Known RBP	32.41	■■■□□ 2.78
FBXL16-205	ENST00000562648	NPM3	O75607	178 aa	Known RBP	32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	GBP6	Q6ZN66	633 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	RUBCN	Q92622	972 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	ATRNL1	Q5VV63	1379 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	YDJC	A8MPS7	323 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	RPS6KA5	O75582	802 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	EMB	Q6PCB8	327 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	KLHL7	Q8IXQ5	586 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	GDF3	Q9NR23	364 aa		32.4	■■■□□ 2.78
FBXL16-205	ENST00000562648	FAM13A	O94988	1023 aa		32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648	C1orf186	Q6ZWK4	172 aa		32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648	FAM76A	Q8TAV0	307 aa		32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648	RNF14	Q9UBS8	474 aa		32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648		H0YIN7	160 aa		32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648	PIK3CD	O00329	1044 aa		32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648	RPL13	P26373	211 aa	Known RBP	32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648	BORCS6	Q96GS4	357 aa		32.39	■■■□□ 2.78
FBXL16-205	ENST00000562648	PSMD10	O75832	226 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	GUCY2F	P51841	1108 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	JAM2	P57087	298 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	CASKIN2	Q8WXE0	1202 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	ENTPD3	O75355	529 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	GFPT2	O94808	682 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	GLE1	Q53GS7	698 aa	Known RBP	32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	DNAJC21	Q5F1R6	531 aa	Known RBP	32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	CDAN1	Q8IWY9	1227 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	USP38	Q8NB14	1042 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	CAVIN3	Q969G5	261 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	OLFML3	Q9NRN5	406 aa		32.38	■■■□□ 2.77
FBXL16-205	ENST00000562648	TRIM66	O15016	1216 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	RAD51C	O43502	376 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	TNFRSF8	P28908	595 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	RPS6KA1	Q15418	735 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	TTMP	Q5BVD1	217 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	IFT20	Q8IY31	132 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	ZIM3	Q96PE6	472 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	SH3GL2	Q99962	352 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	TTC19	Q6DKK2	380 aa	Predicted RBP	32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	LRRC57	Q8N9N7	239 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	METTL14	Q9HCE5	456 aa	Known RBP	32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	RSPH14	Q9UHP6	348 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	KIF13B	Q9NQT8	1826 aa		32.37	■■■□□ 2.77
FBXL16-205	ENST00000562648	DDX3X	O00571	662 aa	Known RBP eCLIP	32.36	■■■□□ 2.77	4e-6	■■■■■ 27.3
FBXL16-205	ENST00000562648	SLC16A3	O15427	465 aa	Known RBP	32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	KIF4A	O95239	1232 aa		32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	FAM186B	Q8IYM0	893 aa		32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	RABEP2	Q9H5N1	569 aa		32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	IVL	P07476	585 aa		32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	PRKCI	P41743	596 aa		32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	CC2D2B	Q6DHV5	1058 aa		32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	FIZ1	Q96SL8	496 aa		32.36	■■■□□ 2.77
FBXL16-205	ENST00000562648	AR	P10275	920 aa		32.35	■■■□□ 2.77
FBXL16-205	ENST00000562648	ANKRD65	E5RJM6	399 aa		32.35	■■■□□ 2.77
FBXL16-205	ENST00000562648	KRT14	P02533	472 aa		32.35	■■■□□ 2.77
FBXL16-205	ENST00000562648	TAF4B	Q92750	862 aa		32.35	■■■□□ 2.77
FBXL16-205	ENST00000562648	CCDC43	Q96MW1	224 aa	Known RBP	32.35	■■■□□ 2.77
FBXL16-205	ENST00000562648	RRP15	Q9Y3B9	282 aa	Known RBP	32.35	■■■□□ 2.77
FBXL16-205	ENST00000562648	BZW2	Q9Y6E2	419 aa	Known RBP	32.35	■■■□□ 2.77
FBXL16-205	ENST00000562648	CYP2J2	P51589	502 aa		32.34	■■■□□ 2.77
FBXL16-205	ENST00000562648	SRL	Q86TD4	932 aa		32.34	■■■□□ 2.77
FBXL16-205	ENST00000562648	BANK1	Q8NDB2	785 aa		32.34	■■■□□ 2.77
FBXL16-205	ENST00000562648	U2AF1L4	Q8WU68	220 aa	Known RBP	32.34	■■■□□ 2.77
FBXL16-205	ENST00000562648	AP1M1	Q9BXS5	423 aa		32.34	■■■□□ 2.77
FBXL16-205	ENST00000562648	NENF	Q9UMX5	172 aa		32.34	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms