RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 PPP2R5EQ16537 467 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 SLC18A3Q16572 532 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 Q4G0T1 1027 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 TDRD12Q587J7 1177 aaKnown RBP8.22□□□□□ -1.09
CFDP1-202ENST00000562602 HERC4Q5GLZ8 1057 aaPredicted RBP8.22□□□□□ -1.09
CFDP1-202ENST00000562602 FAM83BQ5T0W9 1011 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 DPP8Q6V1X1 898 aaPredicted RBP8.22□□□□□ -1.09
CFDP1-202ENST00000562602 FAM196AQ6ZSG2 479 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 STXBP4Q6ZWJ1 553 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 DYMQ7RTS9 669 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 TRIM59Q8IWR1 403 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 SYCE1Q8N0S2 351 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 ZNF511Q8NB15 262 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 TEKT1Q969V4 418 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 CAPZA3Q96KX2 299 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 TRIM34Q9BYJ4 488 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 ZC3H12CQ9C0D7 883 aaKnown RBP8.22□□□□□ -1.09
CFDP1-202ENST00000562602 FAM204AQ9H8W3 233 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 KCNMB3Q9NPA1 279 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 USP40Q9NVE5 1235 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 HDAC6Q9UBN7 1215 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 TRIM10Q9UDY6 481 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 JAG2Q9Y219 1238 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 TRAF3IP3Q9Y228 551 aa8.22□□□□□ -1.09
CFDP1-202ENST00000562602 GOLGA6CA6NDK9 693 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 SRRM3A6NNA2 597 aaPredicted RBP8.21□□□□□ -1.1
CFDP1-202ENST00000562602 SLC37A4O43826 429 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 SHOX2O60902 331 aaPredicted RBP8.21□□□□□ -1.1
CFDP1-202ENST00000562602 FLOT1O75955 427 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 TRIM37O94972 964 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 TDP2O95551 362 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 F12P00748 615 aaPredicted RBP8.21□□□□□ -1.1
CFDP1-202ENST00000562602 GOLGA6DP0CG33 693 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 NPEPPSP55786 919 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 KLHL30Q0D2K2 578 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 ADAM9Q13443 819 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 NFIL3Q16649 462 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 SLC4A8Q2Y0W8 1093 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 C8orf74Q6P047 294 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 TRIM46Q7Z4K8 759 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 GPBP1Q86WP2 473 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 MREGQ8N565 214 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 LRRC15Q8TF66 581 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 HAS1Q92839 578 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 COA7Q96BR5 231 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 POLR3CQ9BUI4 534 aaPredicted RBP8.21□□□□□ -1.1
CFDP1-202ENST00000562602 AMNQ9BXJ7 453 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 EHMT1Q9H9B1 1298 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 TMEM260Q9NX78 707 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 GOLGA6AQ9NYA3 693 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 KCND2Q9NZV8 630 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 LIMD1Q9UGP4 676 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 ARMCX3Q9UH62 379 aaPredicted RBP8.21□□□□□ -1.1
CFDP1-202ENST00000562602 DIS3Q9Y2L1 958 aaKnown RBP8.21□□□□□ -1.1
CFDP1-202ENST00000562602 PCDHGC5Q9Y5F6 944 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 UBE4BO95155 1302 aa8.21□□□□□ -1.1
CFDP1-202ENST00000562602 A0A0A6YYK5 440 aaPredicted RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 SHTN1A0MZ66 631 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 ZNF263O14978 683 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 EIF3DO15371 548 aaKnown RBP eCLIP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 SRGAP2O75044 1071 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 PRPF6O94906 941 aaKnown RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 MOCS3O95396 460 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 SYF2O95926 243 aaKnown RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 AFPP02771 609 aaKnown RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 GYS1P13807 737 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 AKR1B1P15121 316 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 NPR1P16066 1061 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 CYP11B2P19099 503 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 RPA1P27694 616 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 CIITAP33076 1130 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 PRKCIP41743 596 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 SLC1A4P43007 532 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 KLK7P49862 253 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 MMP14P50281 582 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 GTF2IP78347 998 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 RASSF7Q02833 373 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 RAD51AP2Q09MP3 1159 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 CUL1Q13616 776 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 GRIK5Q16478 980 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 KNOP1Q1ED39 458 aaKnown RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 BMT2Q1RMZ1 405 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 DNAJC21Q5F1R6 531 aaKnown RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 EMC10Q5UCC4 262 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 HGSNATQ68CP4 663 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 TMEM179Q6ZVK1 233 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 PODNQ7Z5L7 613 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 CD302Q8IX05 232 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 SYT2Q8N9I0 419 aaPredicted RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 GMCL1P1Q8NEA9 526 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 LRRC45Q96CN5 670 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 GMCL1Q96IK5 515 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 SH3GL2Q99962 352 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 MKNK1Q9BUB5 465 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 ANO3Q9BYT9 981 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 RASSF4Q9H2L5 321 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 SLC24A3Q9HC58 644 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 PI4KBQ9UBF8 816 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms