RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 GIT2Q14161 759 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 OTUD6AQ7L8S5 288 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 TLK2Q86UE8 772 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 DNAJC5GQ8N7S2 189 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 CCDC47Q96A33 483 aaKnown RBP12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 FAM167AQ96KS9 214 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 CCDC43Q96MW1 224 aaKnown RBP12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 REEP2Q9BRK0 252 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 GTPBP4Q9BZE4 634 aaKnown RBP12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 EXOC1Q9NV70 894 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 TSKSQ9UJT2 592 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 Q9Y3F1 56 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 CEP350Q5VT06 3117 aa12.06□□□□□ -0.48
AC009054.2-201ENST00000561956 HMGCRP04035 888 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 LGALS2P05162 132 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 MMP3P08254 477 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 IDEP14735 1019 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 ELNP15502 786 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 SLC26A2P50443 739 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 NPEPPSP55786 919 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 CACNB2Q08289 660 aaPredicted RBP12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 RAD51AP2Q09MP3 1159 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 COASYQ13057 564 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 XKR9Q5GH70 373 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 MAP3K21Q5TCX8 1036 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 ZNF658Q5TYW1 1059 aaPredicted RBP12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 TRIM50Q86XT4 487 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 CCDC65Q8IXS2 484 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 MLKLQ8NB16 471 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 FAM200AQ8TCP9 573 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 RAET1EQ8TD07 263 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 PXYLP1Q8TE99 480 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 GLG1Q92896 1179 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 LENG1Q96BZ8 264 aaPredicted RBP12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 CEP170P1Q96L14 293 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 BPIFA3Q9BQP9 254 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 TIPINQ9BVW5 301 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 NIFKQ9BYG3 293 aaKnown RBP12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 RBSNQ9H1K0 784 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 SMARCAD1Q9H4L7 1026 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 ODF2LQ9ULJ1 636 aa12.05□□□□□ -0.48
AC009054.2-201ENST00000561956 HTTP42858 3142 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 A6NJR5 290 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 RSPH10B2B2RC85 870 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 SEPT4O43236 478 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 DYNC1LI2O43237 492 aaPredicted RBP12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 USO1O60763 962 aaKnown RBP12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 DUSP11O75319 330 aaKnown RBP12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 PPFIA4O75335 1185 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 TBCAO75347 108 aaKnown RBP12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 RSPH10BP0C881 870 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 ZNF165P49910 485 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 ZNF131P52739 623 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 MAPK7Q13164 816 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 PSMD2Q13200 908 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 PLCB4Q15147 1175 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 DGKDQ16760 1214 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 SMYD4Q8IYR2 804 aaPredicted RBP12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 ATP8B4Q8TF62 1192 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 CEP89Q96ST8 783 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 SH2D3AQ9BRG2 576 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 NAT10Q9H0A0 1025 aaKnown RBP12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 CBX8Q9HC52 389 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 CYP26B1Q9NR63 512 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 NRBP2Q9NSY0 501 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 PANK4Q9NVE7 773 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 DACH1Q9UI36 760 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 GDAQ9Y2T3 454 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 PPME1Q9Y570 386 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 MYH11P35749 1972 aa12.04□□□□□ -0.48
AC009054.2-201ENST00000561956 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 HIP1RO75146 1068 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 DGAT1O75907 488 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 GAP43P17677 238 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 MARK3P27448 753 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 STK4Q13043 487 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 IQCB1Q15051 598 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 TARBP2Q15633 366 aaKnown RBP12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 MTERF2Q49AM1 385 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 CT47A1Q5JQC4 288 aaPredicted RBP12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 FAM26FQ5R3K3 315 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 DAW1Q8N136 415 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 KIAA0895Q8NCT3 520 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 RNF214Q8ND24 703 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 HPS3Q969F9 1004 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 AP5M1Q9H0R1 490 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 UPF3AQ9H1J1 476 aaKnown RBP12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 PDLIM7Q9NR12 457 aa12.03□□□□□ -0.48
AC009054.2-201ENST00000561956 ERAP1Q9NZ08 941 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms