RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 CLIC2O15247 247 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 SERPING1P05155 500 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 CASP4P49662 377 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 ZC2HC1CQ53FD0 456 aaPredicted RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 RNF207Q6ZRF8 634 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 ZNF720Q7Z2F6 126 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 FAM178BQ8IXR5 827 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 SECISBP2LQ93073 1101 aaKnown RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 EPC1Q9H2F5 836 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 DICER1Q9UPY3 1922 aaKnown RBP10.77□□□□□ -0.68
SMG1-205ENST00000561947 TLR2O60603 784 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 ATP1A1P05023 1023 aaKnown RBP10.77□□□□□ -0.69
SMG1-205ENST00000561947 ZSCAN20P17040 1043 aaPredicted RBP10.77□□□□□ -0.69
SMG1-205ENST00000561947 TUBB4BP68371 445 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 APBA1Q02410 837 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 TDRD12Q587J7 1177 aaKnown RBP10.77□□□□□ -0.69
SMG1-205ENST00000561947 DCAF17Q5H9S7 520 aaPredicted RBP10.77□□□□□ -0.69
SMG1-205ENST00000561947 PAPD7Q5XG87 772 aaKnown RBP10.77□□□□□ -0.69
SMG1-205ENST00000561947 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 WNK4Q96J92 1243 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 C12orf42Q96LP6 360 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 PLCB1Q9NQ66 1216 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 PXMP2Q9NR77 195 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 RNF146Q9NTX7 359 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 TBC1D22BQ9NU19 505 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 DUSP10Q9Y6W6 482 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 ANO9A1A5B4 782 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 MACROD2A1Z1Q3 448 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 CTAGE15A4D2H0 777 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 RBAK-RBAKDNI3L0D1 243 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 ENC1O14682 589 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 PJA2O43164 708 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 HIP1RO75146 1068 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 TFRCP02786 760 aaKnown RBP10.77□□□□□ -0.69
SMG1-205ENST00000561947 CTAGE8P0CG41 777 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 MAGEA1P43355 309 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 CBX1P83916 185 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 MAPK7Q13164 816 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 ODR4Q5SWX8 454 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 DPY19L2P1Q6NXN4 242 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 CTAGE6Q86UF2 777 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 CTAGE4Q8IX94 777 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 DAW1Q8N136 415 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 TRPM4Q8TD43 1214 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 RMDN3Q96TC7 470 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 PDCD2LQ9BRP1 358 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 DBR1Q9UK59 544 aaKnown RBP10.77□□□□□ -0.69
SMG1-205ENST00000561947 ZHX2Q9Y6X8 837 aa10.77□□□□□ -0.69
SMG1-205ENST00000561947 LYPLA2O95372 231 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 MYCLP12524 364 aaPredicted RBP10.76□□□□□ -0.69
SMG1-205ENST00000561947 QARSP47897 775 aaKnown RBP10.76□□□□□ -0.69
SMG1-205ENST00000561947 RAPGEF1Q13905 1077 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 PRAMEF18Q5VWM3 479 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 TMCO3Q6UWJ1 677 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 NSMFQ6X4W1 530 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 HS2ST1Q7LGA3 356 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 TXLNBQ8N3L3 684 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 REPS2Q8NFH8 660 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 SLC35C1Q96A29 364 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 BORCS6Q96GS4 357 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 MKNK1Q9BUB5 465 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 PARD6BQ9BYG5 372 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 AIPL1Q9NZN9 384 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 HDAC6Q9UBN7 1215 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 PCDHB13Q9Y5F0 798 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 SAR1BQ9Y6B6 198 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 WDR81Q562E7 1941 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 C19orf81C9J6K1 198 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 SLC9A1P19634 815 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 PON1P27169 355 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 DSG3P32926 999 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
SMG1-205ENST00000561947 OAZ1P54368 228 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 GFPT1Q06210 699 aaPredicted RBP10.76□□□□□ -0.69
SMG1-205ENST00000561947 ASIC2Q16515 512 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 EXOC3L4Q17RC7 722 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 ARHGEF16Q5VV41 709 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 TCERG1LQ5VWI1 586 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 KSR1Q8IVT5 923 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 FAM186BQ8IYM0 893 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 STRA6Q9BX79 667 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 IKZF4Q9H2S9 585 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 FAM53CQ9NYF3 392 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 GPRC5DQ9NZD1 345 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 FZD1Q9UP38 647 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 SAMM50Q9Y512 469 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 RIPK3Q9Y572 518 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 WDR90Q96KV7 1748 aa10.76□□□□□ -0.69
SMG1-205ENST00000561947 SSC5DA1L4H1 1573 aa10.75□□□□□ -0.69
SMG1-205ENST00000561947 GTPBP10A4D1E9 387 aaKnown RBP10.75□□□□□ -0.69
SMG1-205ENST00000561947 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
SMG1-205ENST00000561947 PPP1R12BO60237 982 aaPredicted RBP10.75□□□□□ -0.69
SMG1-205ENST00000561947 TACC1O75410 805 aa10.75□□□□□ -0.69
SMG1-205ENST00000561947 PPP1R37O75864 691 aa10.75□□□□□ -0.69
SMG1-205ENST00000561947 ZRANB2O95218 330 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMG1-205ENST00000561947 ACTN1P12814 892 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms