RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 EYA2O00167 538 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 GSTT1P30711 240 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 KIF11P52732 1056 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 RTN1Q16799 776 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 STK32AQ8WU08 396 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 EEF2KMTQ96G04 330 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 NOX5Q96PH1 765 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 UBAC1Q9BSL1 405 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 FBXL5Q9UKA1 691 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 SNX3O60493 162 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 RPL13P26373 211 aaKnown RBP20.22■□□□□ 0.83
RAB40C-206ENST00000561781 SKIV2L2P42285 1042 aaKnown RBP20.22■□□□□ 0.83
RAB40C-206ENST00000561781 PDE6CP51160 858 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 INHBCP55103 352 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 CRACR2BQ8N4Y2 399 aaPredicted RBP20.22■□□□□ 0.83
RAB40C-206ENST00000561781 TRIM47Q96LD4 638 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 OCEL1Q9H607 264 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 ZSWIM5Q9P217 1185 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 NRXN2Q9P2S2 1712 aa20.22■□□□□ 0.83
RAB40C-206ENST00000561781 RGL2O15211 777 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 LCA5LO95447 670 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 ZNF174Q15697 407 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 HOOK3Q86VS8 718 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 LONP2Q86WA8 852 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 PTPRN2Q92932 1015 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 FAM136AQ96C01 138 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 SHISA4Q96DD7 197 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 NKX1-2Q9UD57 310 aaPredicted RBP20.21■□□□□ 0.83
RAB40C-206ENST00000561781 USP15Q9Y4E8 981 aaPredicted RBP20.21■□□□□ 0.83
RAB40C-206ENST00000561781 C10orf71Q711Q0 1435 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 PJA2O43164 708 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 TMCC1O94876 653 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 FAM200BP0CF97 657 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 CCDC166P0CW27 439 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 DNA2P51530 1060 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 ERVK-9P63128 1117 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 MPP3Q13368 585 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 FOXB2Q5VYV0 432 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 TIPINQ9BVW5 301 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 PUS3Q9BZE2 481 aaKnown RBP20.21■□□□□ 0.83
RAB40C-206ENST00000561781 ATP8A2Q9NTI2 1148 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 CIDEBQ9UHD4 219 aa20.21■□□□□ 0.83
RAB40C-206ENST00000561781 ZMYND8Q9ULU4 1186 aaPredicted RBP20.21■□□□□ 0.83
RAB40C-206ENST00000561781 A0A1W2PQJ5 194 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 BUB1O43683 1085 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 SUN1O94901 812 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 OAS1P00973 400 aaKnown RBP20.2■□□□□ 0.82
RAB40C-206ENST00000561781 TPBGLP0DKB5 382 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 TAF1P21675 1872 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 MMP13P45452 471 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 SH2D4BQ5SQS7 431 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 C2CD5Q86YS7 1000 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 ASAP3Q8TDY4 903 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 GREM2Q9H772 168 aa20.2■□□□□ 0.82
RAB40C-206ENST00000561781 O00370 1275 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 RBBP8NLQ8NC74 664 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-206ENST00000561781 AZIN2Q96A70 460 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 RANBP17Q9H2T7 1088 aaKnown RBP20.19■□□□□ 0.82
RAB40C-206ENST00000561781 PNMA2Q9UL42 364 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 LRCH1Q9Y2L9 728 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 EIF4A3P38919 411 aaKnown RBP20.19■□□□□ 0.82
RAB40C-206ENST00000561781 FIGNQ5HY92 759 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 ZNF365Q70YC5 407 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 ENDOVQ8N8Q3 282 aaKnown RBP20.19■□□□□ 0.82
RAB40C-206ENST00000561781 PIGOQ8TEQ8 1089 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 NCSTNQ92542 709 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 GBP5Q96PP8 586 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 INTS9Q9NV88 658 aaKnown RBP20.19■□□□□ 0.82
RAB40C-206ENST00000561781 PLAGL2Q9UPG8 496 aa20.19■□□□□ 0.82
RAB40C-206ENST00000561781 COL11A2P13942 1736 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-206ENST00000561781 CCNB1P14635 433 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 SF3A3Q12874 501 aaKnown RBP eCLIP20.18■□□□□ 0.82
RAB40C-206ENST00000561781 DIXDC1Q155Q3 683 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 SPDYCQ5MJ68 293 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 GPIHBP1Q8IV16 184 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 PDP2Q9P2J9 529 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 WDR37Q9Y2I8 494 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 NID2Q14112 1375 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 PALM3A6NDB9 673 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-206ENST00000561781 AKR1B10O60218 316 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 DPEP1P16444 411 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 HNRNPH3P31942 346 aaKnown RBP20.18■□□□□ 0.82
RAB40C-206ENST00000561781 CTSWP56202 376 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 RNASE9P60153 205 aaKnown RBP20.18■□□□□ 0.82
RAB40C-206ENST00000561781 PTGDRQ13258 359 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 PARP6Q2NL67 630 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 MUM1Q2TAK8 710 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 SELENOSQ9BQE4 189 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 RXFP1Q9HBX9 757 aa20.18■□□□□ 0.82
RAB40C-206ENST00000561781 ZNF219Q9P2Y4 722 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-206ENST00000561781 BZW2Q9Y6E2 419 aaKnown RBP20.18■□□□□ 0.82
RAB40C-206ENST00000561781 PEX11AO75192 247 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 MAGEA1P43355 309 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 TMED1Q13445 227 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 CCDC152Q4G0S7 254 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 CHADLQ6NUI6 762 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 PHC3Q8NDX5 983 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 MYH1P12882 1939 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms