RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 NME8Q8N427 588 aa18.29■□□□□ 0.52
USB1-204ENST00000561568 TRIM43Q96BQ3 446 aaPredicted RBP18.29■□□□□ 0.52
USB1-204ENST00000561568 CEP170P1Q96L14 293 aa18.29■□□□□ 0.52
USB1-204ENST00000561568 CTAGE1Q96RT6 745 aa18.29■□□□□ 0.52
USB1-204ENST00000561568 JPH2Q9BR39 696 aaPredicted RBP18.29■□□□□ 0.52
USB1-204ENST00000561568 SCAND2PQ9GZW5 306 aaPredicted RBP18.29■□□□□ 0.52
USB1-204ENST00000561568 NT5C3AQ9H0P0 336 aa18.29■□□□□ 0.52
USB1-204ENST00000561568 HIPK3Q9H422 1215 aa18.29■□□□□ 0.52
USB1-204ENST00000561568 CYP26B1Q9NR63 512 aa18.29■□□□□ 0.52
USB1-204ENST00000561568 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 CAND2O75155 1236 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 NCLP19338 710 aaKnown RBP18.28■□□□□ 0.52
USB1-204ENST00000561568 TMOD1P28289 359 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 TBC1D8BQ0IIM8 1120 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 XKR9Q5GH70 373 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 ZNF579Q8NAF0 562 aaKnown RBP18.28■□□□□ 0.52
USB1-204ENST00000561568 TRAPPC12Q8WVT3 735 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 CALML4Q96GE6 196 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 NOC4LQ9BVI4 516 aaKnown RBP18.28■□□□□ 0.52
USB1-204ENST00000561568 CCSER1Q9C0I3 900 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 CSRNP2Q9H175 543 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 DBR1Q9UK59 544 aaKnown RBP18.28■□□□□ 0.52
USB1-204ENST00000561568 KIAA1024Q9UPX6 916 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 KAT6AQ92794 2004 aa18.28■□□□□ 0.52
USB1-204ENST00000561568 KDM3AQ9Y4C1 1321 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 PP2D1A8MPX8 630 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 CUTAO60888 179 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 DNM2P50570 870 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 RBL2Q08999 1139 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 MTERF2Q49AM1 385 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 HYIQ5T013 277 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 CABP7Q86V35 215 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 ZNF710Q8N1W2 664 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 PIGOQ8TEQ8 1089 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 CDK5RAP3Q96JB5 506 aa18.27■□□□□ 0.52
USB1-204ENST00000561568 LBHD1Q9BQE6 289 aaPredicted RBP18.27■□□□□ 0.52
USB1-204ENST00000561568 MMTAG2Q9BU76 263 aaKnown RBP18.27■□□□□ 0.52
USB1-204ENST00000561568 ZBTB39O15060 712 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 MAFO75444 373 aaPredicted RBP18.26■□□□□ 0.51
USB1-204ENST00000561568 PARNO95453 639 aaKnown RBP18.26■□□□□ 0.51
USB1-204ENST00000561568 C22orf31O95567 290 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 CKBP12277 381 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 TXLNAP40222 546 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 THPOP40225 353 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 RFC5P40937 340 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 ME1P48163 572 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 NPEPPSP55786 919 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 GRIN1Q05586 938 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 MFSD5Q6N075 450 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 EFCAB12Q6NXP0 572 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 TMEM199Q8N511 208 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 METTL13Q8N6R0 699 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 SLC7A3Q8WY07 619 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 SPATA32Q96LK8 384 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
USB1-204ENST00000561568 CLIC6Q96NY7 704 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 DDX19AQ9NUU7 478 aaKnown RBP18.26■□□□□ 0.51
USB1-204ENST00000561568 CCDC39Q9UFE4 941 aa18.26■□□□□ 0.51
USB1-204ENST00000561568 ZMYND8Q9ULU4 1186 aaPredicted RBP18.26■□□□□ 0.51
USB1-204ENST00000561568 TMEM150BA6NC51 233 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 SYN1P17600 705 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 RARRES1P49788 294 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 CDC42EP1Q00587 391 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 ZRSR1Q15695 479 aaKnown RBP18.25■□□□□ 0.51
USB1-204ENST00000561568 ECM1Q16610 540 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 TRIM71Q2Q1W2 868 aaKnown RBP18.25■□□□□ 0.51
USB1-204ENST00000561568 IER5Q5VY09 327 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 PLA2G4FQ68DD2 849 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 POTEGQ6S5H5 508 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 LEO1Q8WVC0 666 aaPredicted RBP18.25■□□□□ 0.51
USB1-204ENST00000561568 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 DHX38Q92620 1227 aaKnown RBP18.25■□□□□ 0.51
USB1-204ENST00000561568 SH2D3AQ9BRG2 576 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 PPP1R12CQ9BZL4 782 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 PCDHA7Q9UN72 937 aa18.25■□□□□ 0.51
USB1-204ENST00000561568 A0A087WWV3 80 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 IGKV6-21A0A0C4DH24 114 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 H0YGN5 161 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
USB1-204ENST00000561568 DGAT1O75907 488 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 IQCF3P0C7M6 154 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 SELPP16109 830 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 CYP2C18P33260 490 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 POLGP54098 1239 aaPredicted RBP18.24■□□□□ 0.51
USB1-204ENST00000561568 SPECC1Q5M775 1068 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 RUFY4Q6ZNE9 571 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 KIAA0319LQ8IZA0 1049 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 RASSF8Q8NHQ8 419 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 EPSTI1Q96J88 318 aa18.24■□□□□ 0.51
USB1-204ENST00000561568 DHX33Q9H6R0 707 aaKnown RBP18.24■□□□□ 0.51
USB1-204ENST00000561568 WDR81Q562E7 1941 aa18.23■□□□□ 0.51
USB1-204ENST00000561568 RSPH10B2B2RC85 870 aa18.23■□□□□ 0.51
USB1-204ENST00000561568 M0QZ92 97 aa18.23■□□□□ 0.51
USB1-204ENST00000561568 EYA4O95677 639 aa18.23■□□□□ 0.51
USB1-204ENST00000561568 RSPH10BP0C881 870 aa18.23■□□□□ 0.51
USB1-204ENST00000561568 ITGB8P26012 769 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms