RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 DTLQ9NZJ0 730 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 ASH2LQ9UBL3 628 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 B4GALT6Q9UBX8 382 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 CBLCQ9ULV8 474 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 PTPRTO14522 1441 aa5.04□□□□□ -1.6
HERC1-215ENST00000561436 IQSEC2Q5JU85 1478 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 SLC12A8A0AV02 714 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 H7C1D1 291 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 F2P00734 622 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 S100BP04271 92 aaPredicted RBP5.03□□□□□ -1.6
HERC1-215ENST00000561436 CKMP06732 381 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 THBS2P35442 1172 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 KPNA1P52294 538 aaPredicted RBP5.03□□□□□ -1.6
HERC1-215ENST00000561436 ZNF174Q15697 407 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 NT5DC1Q5TFE4 455 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 CYP4F22Q6NT55 531 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 NECAB2Q7Z6G3 386 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 SPATS2Q86XZ4 545 aaKnown RBP5.03□□□□□ -1.6
HERC1-215ENST00000561436 CARFQ8N187 725 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 TOE1Q96GM8 510 aaKnown RBP5.03□□□□□ -1.6
HERC1-215ENST00000561436 BOCQ9BWV1 1114 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 MTFR1LQ9H019 292 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 SMOC1Q9H4F8 434 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 CROTQ9UKG9 612 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 ZCCHC11Q5TAX3 1644 aaKnown RBP5.03□□□□□ -1.6
HERC1-215ENST00000561436 PLCH2O75038 1416 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 EEA1Q15075 1411 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 DISP3Q9P2K9 1392 aa5.03□□□□□ -1.6
HERC1-215ENST00000561436 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.02□□□□□ -1.61
HERC1-215ENST00000561436 PTPDC1A2A3K4 754 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 DDX3XO00571 662 aaKnown RBP eCLIP5.02□□□□□ -1.61
HERC1-215ENST00000561436 RAB11FIP3O75154 756 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 PDE6AP16499 860 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 KCNA6P17658 529 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 LSSP48449 732 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 HSPA2P54652 639 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 JAM2P57087 298 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 NKX3-2P78367 333 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 LACTBP83111 547 aaPredicted RBP5.02□□□□□ -1.61
HERC1-215ENST00000561436 FAPQ12884 760 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 STAT4Q14765 748 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 SEPT7Q16181 437 aaKnown RBP5.02□□□□□ -1.61
HERC1-215ENST00000561436 FIGNQ5HY92 759 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 MCTP2Q6DN12 878 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 ARHGAP36Q6ZRI8 547 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 ZC3H18Q86VM9 953 aaKnown RBP5.02□□□□□ -1.61
HERC1-215ENST00000561436 OSTM1Q86WC4 334 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 PTRH1Q86Y79 214 aaKnown RBP5.02□□□□□ -1.61
HERC1-215ENST00000561436 TRIM48Q8IWZ4 208 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 LINC00482Q8N8I6 264 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 PHOSPHO1Q8TCT1 267 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 PCIF1Q9H4Z3 704 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 DSEQ9UL01 958 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 DUSP10Q9Y6W6 482 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 CFAP43Q8NDM7 1665 aa5.02□□□□□ -1.61
HERC1-215ENST00000561436 ATP10AO60312 1499 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 ACOT7O00154 380 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 PRICKLE3O43900 615 aaPredicted RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 ULK1O75385 1050 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 KRT37O76014 449 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 SASH1O94885 1247 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 AMY2AP04746 511 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 PDGFRBP09619 1106 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 BPIP17213 487 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 AMY2BP19961 511 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 GJA4P35212 333 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 GLRBP48167 497 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 KCNC1P48547 511 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 SARSP49591 514 aaKnown RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 CDKN1CP49918 316 aaPredicted RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 GUCY2FP51841 1108 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 CTSWP56202 376 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 ATP13A4Q4VNC1 1196 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 HABP4Q5JVS0 413 aaKnown RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 IQSEC1Q6DN90 963 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 LILRA6Q6PI73 481 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 OVCH1Q7RTY7 1134 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 PROSER1Q86XN7 944 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 RPUSD2Q8IZ73 545 aaKnown RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 KYQ8NBH2 561 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 SMC1BQ8NDV3 1235 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 UHMK1Q8TAS1 419 aaKnown RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 GPR101Q96P66 508 aaPredicted RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 THG1LQ9NWX6 298 aaKnown RBP5.01□□□□□ -1.61
HERC1-215ENST00000561436 SLC5A4Q9NY91 659 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 NTMQ9P121 344 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 ATP23Q9Y6H3 246 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 ADAMTSL3P82987 1691 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 ABCA9Q8IUA7 1624 aa5.01□□□□□ -1.61
HERC1-215ENST00000561436 C9orf84Q5VXU9 1444 aa5□□□□□ -1.61
HERC1-215ENST00000561436 UHRF1BP1Q6BDS2 1440 aa5□□□□□ -1.61
HERC1-215ENST00000561436 SCAPERQ9BY12 1400 aa5□□□□□ -1.61
HERC1-215ENST00000561436 CNTLNQ9NXG0 1405 aa5□□□□□ -1.61
HERC1-215ENST00000561436 TRAPPC8Q9Y2L5 1435 aa5□□□□□ -1.61
HERC1-215ENST00000561436 SH3D21A4FU49 640 aa5□□□□□ -1.61
HERC1-215ENST00000561436 FAM83GA6ND36 823 aa5□□□□□ -1.61
HERC1-215ENST00000561436 FAM90A27PA6NNH2 459 aa5□□□□□ -1.61
HERC1-215ENST00000561436 ZNF891A8MT65 544 aaPredicted RBP5□□□□□ -1.61
HERC1-215ENST00000561436 ZNF561-AS1K7EIQ3 104 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms