RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KCNC2Q96PR1 638 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 P2RX7Q99572 595 aaKnown RBP5.01□□□□□ -1.61
HERC1-211ENST00000560983 UTP14AQ9BVJ6 771 aaKnown RBP5.01□□□□□ -1.61
HERC1-211ENST00000560983 MXD3Q9BW11 206 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 NT5C1AQ9BXI3 368 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 C1QTNF1Q9BXJ1 281 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 DEFB129Q9H1M3 183 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 TNFRSF10DQ9UBN6 386 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 CEMIPQ8WUJ3 1361 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 LAMB4A4D0S4 1761 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 UBR2Q8IWV8 1755 aa5.01□□□□□ -1.61
HERC1-211ENST00000560983 COL2A1P02458 1487 aaPredicted RBP5□□□□□ -1.61
HERC1-211ENST00000560983 SSC5DA1L4H1 1573 aa5□□□□□ -1.61
HERC1-211ENST00000560983 IRS4O14654 1257 aaPredicted RBP5□□□□□ -1.61
HERC1-211ENST00000560983 SASH1O94885 1247 aa5□□□□□ -1.61
HERC1-211ENST00000560983 ZNF205O95201 554 aa5□□□□□ -1.61
HERC1-211ENST00000560983 CTSKP43235 329 aa5□□□□□ -1.61
HERC1-211ENST00000560983 PSMC4P43686 418 aa5□□□□□ -1.61
HERC1-211ENST00000560983 UBXN2AP68543 259 aa5□□□□□ -1.61
HERC1-211ENST00000560983 SSPNQ14714 243 aa5□□□□□ -1.61
HERC1-211ENST00000560983 KIF22Q14807 665 aa5□□□□□ -1.61
HERC1-211ENST00000560983 PARP10Q53GL7 1025 aa5□□□□□ -1.61
HERC1-211ENST00000560983 ZPBP2Q6X784 338 aa5□□□□□ -1.61
HERC1-211ENST00000560983 CEP128Q6ZU80 1094 aa5□□□□□ -1.61
HERC1-211ENST00000560983 HS2ST1Q7LGA3 356 aa5□□□□□ -1.61
HERC1-211ENST00000560983 SLCO6A1Q86UG4 719 aa5□□□□□ -1.61
HERC1-211ENST00000560983 RAET1EQ8TD07 263 aa5□□□□□ -1.61
HERC1-211ENST00000560983 OPTNQ96CV9 577 aa5□□□□□ -1.61
HERC1-211ENST00000560983 ASB2Q96Q27 587 aa5□□□□□ -1.61
HERC1-211ENST00000560983 EYA3Q99504 573 aa5□□□□□ -1.61
HERC1-211ENST00000560983 PLCD4Q9BRC7 762 aa5□□□□□ -1.61
HERC1-211ENST00000560983 SGPP1Q9BX95 441 aa5□□□□□ -1.61
HERC1-211ENST00000560983 IRF2BPLQ9H1B7 796 aa5□□□□□ -1.61
HERC1-211ENST00000560983 UBP1Q9NZI7 540 aa5□□□□□ -1.61
HERC1-211ENST00000560983 KCTD3Q9Y597 815 aa5□□□□□ -1.61
HERC1-211ENST00000560983 USP34Q70CQ2 3546 aa5□□□□□ -1.61
HERC1-211ENST00000560983 CCL15-CCL14A0A0B4J2E2 113 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 B8ZZF3 427 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 CLEC3AO75596 197 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 SYPP08247 313 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 FOSL2P15408 326 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 ENDOUP21128 410 aaKnown RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 HOXD10P28358 340 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 MRE11P49959 708 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 PRKCZQ05513 592 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 CCL15Q16663 113 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 LRRFIP1Q32MZ4 808 aaKnown RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 HSF5Q4G112 596 aaPredicted RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 SEZ6Q53EL9 994 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 ZNF385BQ569K4 471 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 DACT2Q5SW24 774 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 ADGRF1Q5T601 910 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 APOBEC3FQ8IUX4 373 aaKnown RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 ANKRD13AQ8IZ07 590 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 ATXN2LQ8WWM7 1075 aaKnown RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 DACT3Q96B18 629 aaPredicted RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 UHRF1Q96T88 793 aaPredicted RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 EPHX3Q9H6B9 360 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 ANTXR1Q9H6X2 564 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 CNTD2Q9H8S5 307 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 EPB41L4AQ9HCS5 686 aaPredicted RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 PARD6AQ9NPB6 346 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 CHST7Q9NS84 486 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 ERVK13-1Q9NX77 482 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 PODXL2Q9NZ53 605 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 GGT7Q9UJ14 662 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 ZMYM5Q9UJ78 669 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 CNOT6Q9ULM6 557 aaKnown RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 GABRQQ9UN88 632 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 MINPP1Q9UNW1 487 aa4.99□□□□□ -1.61
HERC1-211ENST00000560983 COL3A1P02461 1466 aaPredicted RBP4.99□□□□□ -1.61
HERC1-211ENST00000560983 FAM205AQ6ZU69 1335 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 MYPNQ86TC9 1320 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 BTBD19C9JJ37 291 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 SHOXO15266 292 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 VIPR1P32241 457 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 ZNF165P49910 485 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 GTF2A2P52657 109 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 SF3B3Q15393 1217 aaKnown RBP4.98□□□□□ -1.61
HERC1-211ENST00000560983 KIF6Q6ZMV9 814 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 GK5Q6ZS86 529 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 LRP10Q7Z4F1 713 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 NLRP10Q86W26 655 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 SIRT2Q8IXJ6 389 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 EAF1Q96JC9 268 aaPredicted RBP4.98□□□□□ -1.61
HERC1-211ENST00000560983 ZNF512BQ96KM6 892 aaPredicted RBP4.98□□□□□ -1.61
HERC1-211ENST00000560983 SIGLEC10Q96LC7 697 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 KLHL14Q9P2G3 628 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 CPA4Q9UI42 421 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 ACSL6Q9UKU0 697 aa4.98□□□□□ -1.61
HERC1-211ENST00000560983 RRP7AQ9Y3A4 280 aaKnown RBP4.98□□□□□ -1.61
HERC1-211ENST00000560983 A0A0G2JLL6 359 aaPredicted RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 RFXAPO00287 272 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 N4BP3O15049 544 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 ADCY3O60266 1144 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 TRIM13O60858 407 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 MYL6BP14649 208 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 EPHB3P54753 998 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 CTSWP56202 376 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms