RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TMEM266Q2M3C6 531 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 KRT79Q5XKE5 535 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 NT5DC3Q86UY8 548 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 RASGEF1CQ8N431 466 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 KLHL29Q96CT2 875 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 ZBTB10Q96DT7 871 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 SAAL1Q96ER3 474 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 TXLNGYQ9BZA5 131 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 ERVK-5Q9HDB9 667 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 MLXIPLQ9NP71 852 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 OSGEPQ9NPF4 335 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 ARPP21Q9UBL0 812 aaPredicted RBP17.92■□□□□ 0.46
TPM1-228ENST00000560975 SLIT2O94813 1529 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 ZNF804BA4D1E1 1349 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 CCDC88AQ3V6T2 1871 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 BTNL10A8MVZ5 291 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 ADAMTS2O95450 1211 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 H2AFZP0C0S5 128 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 C11orf91Q3C1V1 193 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 H2AFVQ71UI9 128 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 FBXO25Q8TCJ0 367 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 DYDC1Q8WWB3 177 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 PABPC3Q9H361 631 aaKnown RBP17.91■□□□□ 0.46
TPM1-228ENST00000560975 DAAM1Q9Y4D1 1078 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 CCDC169A6NNP5 214 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 KLRK1P26718 216 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 PSMD2Q13200 908 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 CDCA2Q69YH5 1023 aaPredicted RBP17.91■□□□□ 0.46
TPM1-228ENST00000560975 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
TPM1-228ENST00000560975 PARD3BQ8TEW8 1205 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 SEC14L1Q92503 715 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 DNAJC19Q96DA6 116 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 RAB17Q9H0T7 212 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 SEMA4AQ9H3S1 761 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 KCNMB3Q9NPA1 279 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 PNMA3Q9UL41 463 aa17.91■□□□□ 0.46
TPM1-228ENST00000560975 UCHL3P15374 230 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 POU5F1Q01860 360 aaKnown RBP17.9■□□□□ 0.46
TPM1-228ENST00000560975 C10orf76Q5T2E6 689 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 GJB7Q6PEY0 223 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 USP17L2Q6R6M4 530 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 EGFL6Q8IUX8 553 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 REXO1Q8N1G1 1221 aaKnown RBP17.9■□□□□ 0.46
TPM1-228ENST00000560975 RNF217Q8TC41 542 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 FAM84BQ96KN1 310 aaPredicted RBP17.9■□□□□ 0.46
TPM1-228ENST00000560975 TMEM47Q9BQJ4 181 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 NSRP1Q9H0G5 558 aaKnown RBP17.9■□□□□ 0.46
TPM1-228ENST00000560975 ATP8A2Q9NTI2 1148 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 ZDHHC18Q9NUE0 388 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 FGFR1OP2Q9NVK5 253 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 SLC5A4Q9NY91 659 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 SUCLA2Q9P2R7 463 aaPredicted RBP17.9■□□□□ 0.46
TPM1-228ENST00000560975 AMFRQ9UKV5 643 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 STXBP5LQ9Y2K9 1186 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 SMNDC1O75940 238 aaKnown RBP eCLIP17.9■□□□□ 0.461e-8■■□□□ 11.9
TPM1-228ENST00000560975 FLOT1O75955 427 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 FGFR4P22455 802 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 GNA11P29992 359 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 INHBEP58166 350 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 MIS18BP1Q6P0N0 1132 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 OTUD6AQ7L8S5 288 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 ACSBG1Q96GR2 724 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 MTMR9Q96QG7 549 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 ERP44Q9BS26 406 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 ARHGEF10LQ9HCE6 1279 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 NUP98P52948 1817 aa17.9■□□□□ 0.46
TPM1-228ENST00000560975 SNX3O60493 162 aa17.89■□□□□ 0.46
TPM1-228ENST00000560975 KRT13P13646 458 aa17.89■□□□□ 0.46
TPM1-228ENST00000560975 ABCB4P21439 1286 aa17.89■□□□□ 0.46
TPM1-228ENST00000560975 HERC4Q5GLZ8 1057 aaPredicted RBP17.89■□□□□ 0.46
TPM1-228ENST00000560975 PGM2Q96G03 612 aa17.89■□□□□ 0.46
TPM1-228ENST00000560975 PIGSQ96S52 555 aa17.89■□□□□ 0.46
TPM1-228ENST00000560975 AJAP1Q9UKB5 411 aaPredicted RBP17.89■□□□□ 0.46
TPM1-228ENST00000560975 HDAC9Q9UKV0 1011 aa17.89■□□□□ 0.46
TPM1-228ENST00000560975 PALM3A6NDB9 673 aaPredicted RBP17.89■□□□□ 0.45
TPM1-228ENST00000560975 ERVV-1B6SEH8 477 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 EVI5O60447 810 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 DCAF17Q5H9S7 520 aaPredicted RBP17.89■□□□□ 0.45
TPM1-228ENST00000560975 CEP63Q96MT8 703 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 UBA5Q9GZZ9 404 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 PPP1R9AQ9ULJ8 1098 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 A0A1B0GUL6 1792 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 TCP11X1B4DZS4 312 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 NUDT17P0C025 328 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 MAP2K1Q02750 393 aaPredicted RBP17.89■□□□□ 0.45
TPM1-228ENST00000560975 TCERG1LQ5VWI1 586 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 DUPD1Q68J44 220 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 TRIM68Q6AZZ1 485 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 AADACL2Q6P093 401 aa17.89■□□□□ 0.45
TPM1-228ENST00000560975 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
TPM1-228ENST00000560975 MARCH6O60337 910 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 CCND1P24385 295 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 KLRC3Q07444 240 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 DCAF12L1Q5VU92 463 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 HES6Q96HZ4 224 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
TPM1-228ENST00000560975 E9PMD0 336 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 GNA14O95837 355 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 NR2F2P24468 414 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms