RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CRISPLD1Q9H336 500 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 PLEKHA4Q9H4M7 779 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF408Q9H9D4 720 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 SLC40A1Q9NP59 571 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 RMND1Q9NWS8 449 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 CAPN11Q9UMQ6 739 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 ANGEL1Q9UNK9 670 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 REXO2Q9Y3B8 237 aaKnown RBP6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 FER1L4A9Z1Z3 1794 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 RGPD2P0DJD1 1756 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 MYH2Q9UKX2 1941 aa6.58□□□□□ -1.36
SNRPA1-209ENST00000560307 UBN2Q6ZU65 1347 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 MYH6P13533 1939 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 TMEM238LA0A1B0GVL6 79 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 A0A1W2PQJ5 194 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 MYO1FO00160 1098 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 N4BP3O15049 544 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 TACC1O75410 805 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 CIAO1O76071 339 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 IPO7O95373 1038 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 MMP1P03956 469 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 ATP1A1P05023 1023 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 PSAPP07602 524 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 THBS1P07996 1170 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 PAEPP09466 180 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 IFNAR1P17181 557 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 EEF1GP26641 437 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 HOXA7P31268 230 aaPredicted RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 LSP1P33241 339 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 KRT9P35527 623 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 MDH1P40925 334 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 IL15P40933 162 aaPredicted RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 PPP1R2P41236 205 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 IARSP41252 1262 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 ANTXR2P58335 489 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 HERVK_113P62684 666 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 MAP2K1Q02750 393 aaPredicted RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 XRCC4Q13426 336 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 RIPK1Q13546 671 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 KRT31Q15323 416 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 TTF1Q15361 905 aaPredicted RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 TTMPQ5BVD1 217 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 SNAP47Q5SQN1 464 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 OTUD7BQ6GQQ9 843 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC121Q6ZUS5 278 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 DDX46Q7L014 1031 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 NLRP14Q86W24 1093 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 NLRP8Q86W28 1048 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 STK11IPQ8N1F8 1099 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 OR13H1Q8NG92 308 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 MYCBPAPQ8TBZ2 947 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 RASGRP4Q8TDF6 673 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 TCP11Q8WWU5 503 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 IP6K1Q92551 441 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 APPBP2Q92624 585 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 FERMT2Q96AC1 680 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 RSRC1Q96IZ7 334 aaKnown RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 EAF1Q96JC9 268 aaPredicted RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 NUP88Q99567 741 aaPredicted RBP6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 OSMRQ99650 979 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 GINM1Q9NU53 330 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 SNX12Q9UMY4 172 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 TLR6Q9Y2C9 796 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 HYOU1Q9Y4L1 999 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 PXDNQ92626 1479 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 DLEC1Q9Y238 1755 aa6.57□□□□□ -1.36
SNRPA1-209ENST00000560307 ARAP2Q8WZ64 1704 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 PDS5AQ29RF7 1337 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 C1orf167Q5SNV9 1468 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 DOCK2Q92608 1830 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 LGALS16A8MUM7 142 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 H7C1D1 291 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF213O14771 459 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 POLR2DO15514 142 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 MGRN1O60291 552 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 USO1O60763 962 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 TRPA1O75762 1119 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 RAPGEF3O95398 923 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 CELA3AP09093 270 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 IFIT1P09914 478 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 XRCC5P13010 732 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ACPPP15309 386 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 NFKB1P19838 968 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 NR1D1P20393 614 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 LMNB1P20700 586 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 SCP2P22307 547 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 FGFR3P22607 806 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 LIFRP42702 1097 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 SARNPP82979 210 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 SSRP1Q08945 709 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 PAK1Q13153 545 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 PDCLQ13371 301 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 BIRC3Q13489 604 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 PPP2R5AQ15172 486 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 PPP2R5BQ15173 497 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 NTRK3Q16288 839 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 KIAA0753Q2KHM9 967 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 TCP11X2Q5H9J9 407 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC122Q5T0U0 273 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 CFAP58Q5T655 872 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms