RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 KIAA1683Q9H0B3 1180 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 WDR33Q9C0J8 1336 aaKnown RBP5.39□□□□□ -1.55
LRRC28-218ENST00000560236 GRIN2BQ13224 1484 aa5.39□□□□□ -1.55
LRRC28-218ENST00000560236 TOP2BQ02880 1626 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 SHROOM2Q13796 1616 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 PYGMP11217 842 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 AOAHP28039 575 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 ST5P78524 1137 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 DUSP8Q13202 625 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 TBR1Q16650 682 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 LARP4Q71RC2 724 aaKnown RBP eCLIP5.38□□□□□ -1.55
LRRC28-218ENST00000560236 OTOP2Q7RTS6 562 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 SCUBE1Q8IWY4 988 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 SLC43A3Q8NBI5 491 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 WDR48Q8TAF3 677 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 PTPRN2Q92932 1015 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 CHFRQ96EP1 664 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 PLEKHG4BQ96PX9 1271 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 GMLQ99445 158 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 CDC6Q99741 560 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 TRIM55Q9BYV6 548 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 C11orf21Q9P2W6 132 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 PCDHA8Q9Y5H6 950 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 CEP170Q5SW79 1584 aa5.38□□□□□ -1.55
LRRC28-218ENST00000560236 PRAMEF25A6NGN4 478 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 AMY2AP04746 511 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 C1SP09871 688 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 AMY2BP19961 511 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 ACRV1P26436 265 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 JAM2P57087 298 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 GUCY1A3Q02108 690 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 EIF4HQ15056 248 aaKnown RBP5.37□□□□□ -1.55
LRRC28-218ENST00000560236 CRY1Q16526 586 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 USP30Q70CQ3 517 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 C16orf59Q7L2K0 433 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 ZNF808Q8N4W9 903 aaPredicted RBP5.37□□□□□ -1.55
LRRC28-218ENST00000560236 IL17DQ8TAD2 202 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 WNK4Q96J92 1243 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 IPO9Q96P70 1041 aaKnown RBP5.37□□□□□ -1.55
LRRC28-218ENST00000560236 TRIM8Q9BZR9 551 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 MSL2Q9HCI7 577 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 CBLCQ9ULV8 474 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 SOGA1O94964 1423 aa5.37□□□□□ -1.55
LRRC28-218ENST00000560236 GSTA4O15217 222 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 C4BPAP04003 597 aaKnown RBP5.36□□□□□ -1.55
LRRC28-218ENST00000560236 SRGAP2CP0DJJ0 459 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 NAT1P18440 290 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 HIBADHP31937 336 aaKnown RBP5.36□□□□□ -1.55
LRRC28-218ENST00000560236 MC4RP32245 332 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 MSX2P35548 267 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-218ENST00000560236 MEOX1P50221 254 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 HERVK_113P62684 666 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 SUMO1P63165 101 aaKnown RBP5.36□□□□□ -1.55
LRRC28-218ENST00000560236 DPTQ07507 201 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 FOXL1Q12952 345 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 PCOLCEQ15113 449 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 STILQ15468 1287 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 SPATC1Q76KD6 591 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 FILIP1Q7Z7B0 1213 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 AMER2Q8N7J2 671 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 CFHR4Q92496 578 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 BTBD2Q9BX70 525 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 OR10A2Q9H208 303 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 PLA2G3Q9NZ20 509 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 BTBD7Q9P203 1132 aa5.36□□□□□ -1.55
LRRC28-218ENST00000560236 TDRD9Q8NDG6 1382 aaKnown RBP5.36□□□□□ -1.55
LRRC28-218ENST00000560236 RAD54L2Q9Y4B4 1467 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 DISP3Q9P2K9 1392 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 TRBV23-1A0A0A0MS06 115 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 ARVCFO00192 962 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 KCNK3O14649 394 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 ADCY3O60266 1144 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 ECE1P42892 770 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 MRE11P49959 708 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 PURAQ00577 322 aaKnown RBP5.35□□□□□ -1.55
LRRC28-218ENST00000560236 CD83Q01151 205 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 HHEXQ03014 270 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 SMN1Q16637 294 aaKnown RBP5.35□□□□□ -1.55
LRRC28-218ENST00000560236 FAM47CQ5HY64 1035 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 TRIM68Q6AZZ1 485 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 RTKN2Q8IZC4 609 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 CACTINQ8WUQ7 758 aaKnown RBP5.35□□□□□ -1.55
LRRC28-218ENST00000560236 NEU4Q8WWR8 484 aaPredicted RBP5.35□□□□□ -1.55
LRRC28-218ENST00000560236 IKZF4Q9H2S9 585 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 NELFAQ9H3P2 528 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 TLR9Q9NR96 1032 aa5.35□□□□□ -1.55
LRRC28-218ENST00000560236 A0A0G2JNJ9 132 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 CCDC66A2RUB6 948 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 U2SURPO15042 1029 aaKnown RBP5.34□□□□□ -1.55
LRRC28-218ENST00000560236 CLASP2O75122 1294 aaKnown RBP5.34□□□□□ -1.55
LRRC28-218ENST00000560236 MPIG6BO95866 241 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 DNM2P50570 870 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 INHBEP58166 350 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 GRM7Q14831 915 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 FAM209AQ5JX71 171 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 OR14K1Q8NGZ2 314 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms