RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 MTMR8Q96EF0 704 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 RRP36Q96EU6 259 aaKnown RBP7.11□□□□□ -1.27
CLPX-206ENST00000560166 KIAA1683Q9H0B3 1180 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 GLT8D2Q9H1C3 349 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 FOXP1Q9H334 677 aaPredicted RBP7.11□□□□□ -1.27
CLPX-206ENST00000560166 R3HDMLQ9H3Y0 253 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 CCSER2Q9H7U1 834 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 VCPKMTQ9H867 229 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 ELP3Q9H9T3 547 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 AS3MTQ9HBK9 375 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 TMEM63CQ9P1W3 806 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 PNMA2Q9UL42 364 aa7.11□□□□□ -1.27
CLPX-206ENST00000560166 MORC2Q9Y6X9 1032 aaPredicted RBP7.11□□□□□ -1.27
CLPX-206ENST00000560166 ELP1O95163 1332 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 F5H6K3 240 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 NDUFB10O96000 172 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 NOS3P29474 1203 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 NF2P35240 595 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 SLC1A4P43007 532 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 IREB2P48200 963 aaKnown RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 AFF1P51825 1210 aaKnown RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 USP14P54578 494 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 FKBP1BP68106 108 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 KRT85P78386 507 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 KLRC3Q07444 240 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 RRP1BQ14684 758 aaKnown RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 NFKBIBQ15653 356 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 MAP3K11Q16584 847 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 SKOR2Q2VWA4 1001 aaPredicted RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 NBPF12Q5TAG4 269 aaPredicted RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 KRT40Q6A162 431 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 PDE12Q6L8Q7 609 aaKnown RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 FAM160B2Q86V87 743 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 RAB11FIP4Q86YS3 637 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 LRRC47Q8N1G4 583 aaKnown RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.1□□□□□ -1.27
CLPX-206ENST00000560166 DPF3Q92784 378 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 PHKBQ93100 1093 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 CEP63Q96MT8 703 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 PHF20Q9BVI0 1012 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 OSBPL7Q9BZF2 842 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 SCAND2PQ9GZW5 306 aaPredicted RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 ZFYVE28Q9HCC9 887 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 BRMS1Q9HCU9 246 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 PICK1Q9NRD5 415 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 BARHL2Q9NY43 387 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 SEC63Q9UGP8 760 aaKnown RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 CFAP45Q9UL16 551 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 SCAF8Q9UPN6 1271 aaKnown RBP7.1□□□□□ -1.27
CLPX-206ENST00000560166 SSC5DA1L4H1 1573 aa7.1□□□□□ -1.27
CLPX-206ENST00000560166 A0A1W2PRG0 241 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 C19orf81C9J6K1 198 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 WDR46O15213 610 aaKnown RBP7.09□□□□□ -1.27
CLPX-206ENST00000560166 CYTH3O43739 400 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 BMP3P12645 472 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 GRNP28799 593 aaKnown RBP7.09□□□□□ -1.27
CLPX-206ENST00000560166 TM4SF4P48230 202 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 TRAPPC10P48553 1259 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 JAG1P78504 1218 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 TYRO3Q06418 890 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 PRKG1Q13976 671 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 SF3A1Q15459 793 aaKnown RBP7.09□□□□□ -1.27
CLPX-206ENST00000560166 PRAMEF18Q5VWM3 479 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 MIGA2Q7L4E1 593 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 NOSTRINQ8IVI9 506 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 CD99L2Q8TCZ2 262 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 CHURC1Q8WUH1 139 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 C12orf42Q96LP6 360 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 ZNF396Q96N95 335 aaPredicted RBP7.09□□□□□ -1.27
CLPX-206ENST00000560166 WRNIP1Q96S55 665 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 TGIF2Q9GZN2 237 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 MAF1Q9H063 256 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 ACBD3Q9H3P7 528 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 C12orf49Q9H741 205 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 CAPN10Q9HC96 672 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 PTPN22Q9Y2R2 807 aa7.09□□□□□ -1.27
CLPX-206ENST00000560166 MYPNQ86TC9 1320 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 ZBTB5O15062 677 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 XYLBO75191 536 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 YEATS4O95619 227 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 BMP15O95972 392 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 EPB42P16452 691 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 PTPRAP18433 802 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 FSTP19883 344 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 GNA11P29992 359 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 KRT2P35908 639 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 NASPP49321 788 aaPredicted RBP7.08□□□□□ -1.28
CLPX-206ENST00000560166 GP2P55259 537 aaKnown RBP7.08□□□□□ -1.28
CLPX-206ENST00000560166 CCDC96Q2M329 555 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 SLC35G1Q2M3R5 365 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 RILPL1Q5EBL4 403 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 RAB44Q7Z6P3 723 aaPredicted RBP7.08□□□□□ -1.28
CLPX-206ENST00000560166 CLEC10AQ8IUN9 316 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 DMRTC2Q8IXT2 367 aaPredicted RBP7.08□□□□□ -1.28
CLPX-206ENST00000560166 DIS3L2Q8IYB7 885 aaKnown RBP7.08□□□□□ -1.28
CLPX-206ENST00000560166 BICD2Q8TD16 824 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 ERO1AQ96HE7 468 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms