RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 PADI3Q9ULW8 664 aa23.14■■□□□ 1.29
CHRNA3-207ENST00000559941 SAMM50Q9Y512 469 aa23.14■■□□□ 1.29
CHRNA3-207ENST00000559941 TCF20Q9UGU0 1960 aaKnown RBP23.13■■□□□ 1.29
CHRNA3-207ENST00000559941 EPC2Q52LR7 807 aa23.13■■□□□ 1.29
CHRNA3-207ENST00000559941 RTN4RL1Q86UN2 441 aaPredicted RBP23.13■■□□□ 1.29
CHRNA3-207ENST00000559941 LINC01599Q8WXQ3 324 aa23.13■■□□□ 1.29
CHRNA3-207ENST00000559941 TEKT3Q9BXF9 490 aa23.13■■□□□ 1.29
CHRNA3-207ENST00000559941 DISC1Q9NRI5 854 aa23.13■■□□□ 1.29
CHRNA3-207ENST00000559941 COG5Q9UP83 839 aa23.13■■□□□ 1.29
CHRNA3-207ENST00000559941 EIF5BO60841 1220 aaKnown RBP23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 GAS7O60861 476 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 TDP2O95551 362 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 C22orf31O95567 290 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 SFNP31947 248 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 AK2P54819 239 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 NONOQ15233 471 aaKnown RBP eCLIP23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 LRCH2Q5VUJ6 765 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 MOXD1Q6UVY6 613 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 FAM167AQ96KS9 214 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 MBOAT7Q96N66 472 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 PHF20Q9BVI0 1012 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 RC3H2Q9HBD1 1191 aaKnown RBP23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 KCNJ14Q9UNX9 436 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 CEP131Q9UPN4 1083 aa23.12■■□□□ 1.29
CHRNA3-207ENST00000559941 PSMD10O75832 226 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 JAK3P52333 1124 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 PAK2Q13177 524 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 FAM43BQ6ZT52 329 aaPredicted RBP23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 KRT25Q7Z3Z0 450 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 TMEM192Q8IY95 271 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 FIBCD1Q8N539 461 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 UNC45AQ9H3U1 944 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 CDHR5Q9HBB8 845 aa23.11■■□□□ 1.29
CHRNA3-207ENST00000559941 H3BNC9 293 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 ZNF862O60290 1169 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 CTDNEP1O95476 244 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 XBP1P17861 261 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 TFF2Q03403 129 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 AAK1Q2M2I8 961 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 TRMT1LQ7Z2T5 733 aaKnown RBP23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 CRIPAKQ8N1N5 446 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 GJA10Q969M2 543 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 ZNF689Q96CS4 500 aaPredicted RBP23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 NRBP2Q9NSY0 501 aa23.1■■□□□ 1.29
CHRNA3-207ENST00000559941 ADGRA3Q8IWK6 1321 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 MAGEB2O15479 319 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 CHMP2AO43633 222 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 DGKIO75912 1065 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 OATP04181 439 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 GPM6BQ13491 265 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 INF2Q27J81 1249 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 B3GNT9Q6UX72 402 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 RDM1Q8NG50 284 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 HLA-CQ95604 372 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 TMX1Q9H3N1 280 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 GINS2Q9Y248 185 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 NOC2LQ9Y3T9 749 aaKnown RBP23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 XIRP2A4UGR9 3374 aa23.09■■□□□ 1.29
CHRNA3-207ENST00000559941 MYO7AQ13402 2215 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 RPS6KA5O75582 802 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 LINC00271P0C7V0 271 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 BMP1P13497 986 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 TMEM266Q2M3C6 531 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 ODR4Q5SWX8 454 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 NPAS4Q8IUM7 802 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 METTL13Q8N6R0 699 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 IL27Q8NEV9 243 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 ETNPPLQ8TBG4 499 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 MRPL38Q96DV4 380 aaKnown RBP23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 ERVK-5Q9HDB9 667 aa23.08■■□□□ 1.29
CHRNA3-207ENST00000559941 CCDC194A0A1B0GVG4 234 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 C5orf67F2Z3F1 127 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 DTNBO60941 627 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 RB1P06400 928 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 STAG3L1P0CL83 205 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 CRYBB1P53674 252 aaPredicted RBP23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 PRKCEQ02156 737 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 NFX1Q12986 1120 aaKnown RBP23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 UGCGQ16739 394 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 PTPROQ16827 1216 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 MIER3Q7Z3K6 550 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 LINC01465Q8N7H1 131 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 ADAMTS19Q8TE59 1207 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 TMEM40Q8WWA1 233 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 CLP1Q92989 425 aaKnown RBP23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 GJB4Q9NTQ9 266 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 ORC3Q9UBD5 711 aaPredicted RBP23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 DDX25Q9UHL0 483 aaKnown RBP23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 RWDD3Q9Y3V2 267 aa23.07■■□□□ 1.28
CHRNA3-207ENST00000559941 KIAA1671Q9BY89 1806 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 GPR32O75388 356 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 VTNP04004 478 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 BMPR1AP36894 532 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 CLCN3P51790 818 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 BTG3Q14201 252 aaPredicted RBP23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 ME3Q16798 604 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 KIZQ2M2Z5 673 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 LETM2Q2VYF4 491 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 EFCAB12Q6NXP0 572 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms