RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ZNF280AP59817 542 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-212ENST00000559937 TGFB2P61812 414 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 CYP4A11Q02928 519 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 CXCL9Q07325 125 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 RAD51AP2Q09MP3 1159 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 RAPGEF1Q13905 1077 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 PPP2R5AQ15172 486 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 NAB2Q15742 525 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 IFI16Q16666 785 aaKnown RBP8.87□□□□□ -0.99
SMAD3-212ENST00000559937 EXOC3L4Q17RC7 722 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 KLHDC7AQ5VTJ3 777 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 DPY19L2P1Q6NXN4 242 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 CCDC174Q6PII3 467 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 NOA1Q8NC60 698 aaKnown RBP8.87□□□□□ -0.99
SMAD3-212ENST00000559937 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-212ENST00000559937 CYP2W1Q8TAV3 490 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 CAGE1Q8TC20 777 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 TMEM174Q8WUU8 243 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 VTI1AQ96AJ9 217 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 MMS19Q96T76 1030 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 RHOXF2Q9BQY4 288 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 TMEM39BQ9GZU3 492 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 NLRC4Q9NPP4 1024 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 RGL1Q9NZL6 768 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 DBR1Q9UK59 544 aaKnown RBP8.87□□□□□ -0.99
SMAD3-212ENST00000559937 INTUQ9ULD6 942 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 CCPG1Q9ULG6 757 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 PCDHB13Q9Y5F0 798 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 UBIAD1Q9Y5Z9 338 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 CAPN6Q9Y6Q1 641 aa8.87□□□□□ -0.99
SMAD3-212ENST00000559937 DICER1Q9UPY3 1922 aaKnown RBP8.87□□□□□ -0.99
SMAD3-212ENST00000559937 LTBP3Q9NS15 1303 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 ARHGEF35A5YM69 484 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 PHF20L1A8MW92 1017 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 RSPH10B2B2RC85 870 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 IPO5O00410 1097 aaKnown RBP8.86□□□□□ -0.99
SMAD3-212ENST00000559937 WNT10BO00744 389 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 CES2O00748 559 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 ENC1O14682 589 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 TGFB1I1O43294 461 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 AKAP3O75969 853 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 CLSTN1O94985 981 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 MOCS3O95396 460 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 RSPH10BP0C881 870 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 UCHL3P15374 230 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 FERP16591 822 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 YBX3P16989 372 aaKnown RBP eCLIP8.86□□□□□ -0.996e-6■□□□□ 10.6
SMAD3-212ENST00000559937 RFX1P22670 979 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 PAFAH1B1P43034 410 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 SNRPFP62306 86 aaKnown RBP8.86□□□□□ -0.99
SMAD3-212ENST00000559937 VSNL1P62760 191 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 CTTNQ14247 550 aaKnown RBP8.86□□□□□ -0.99
SMAD3-212ENST00000559937 SMC1AQ14683 1233 aaKnown RBP8.86□□□□□ -0.99
SMAD3-212ENST00000559937 PCNX4Q63HM2 1172 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 XRRA1Q6P2D8 792 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 HS2ST1Q7LGA3 356 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 ZNF720Q7Z2F6 126 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 MIER3Q7Z3K6 550 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 VPS36Q86VN1 386 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 CREG2Q8IUH2 290 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 TPH2Q8IWU9 490 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 C12orf56Q8IXR9 622 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 FAM186BQ8IYM0 893 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 MYCT1Q8N699 235 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 SLC17A8Q8NDX2 589 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 TBC1D5Q92609 795 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 SLC35C1Q96A29 364 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 BORCS6Q96GS4 357 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 SPAG5Q96R06 1193 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 FIZ1Q96SL8 496 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 OSBPL9Q96SU4 736 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 STRA6Q9BX79 667 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 UNC45AQ9H3U1 944 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 MLXIPQ9HAP2 919 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 ABCB6Q9NP58 842 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 MYOZ2Q9NPC6 264 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 JADE2Q9NQC1 790 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 PRDM10Q9NQV6 1147 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 DMAC2Q9NW81 257 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 PIM2Q9P1W9 311 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 HDAC6Q9UBN7 1215 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 TFR2Q9UP52 801 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 ZBTB12Q9Y330 459 aaPredicted RBP8.86□□□□□ -0.99
SMAD3-212ENST00000559937 PCDHGC5Q9Y5F6 944 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 DUSP10Q9Y6W6 482 aa8.86□□□□□ -0.99
SMAD3-212ENST00000559937 WDR90Q96KV7 1748 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 ZNF536O15090 1300 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 MYH9P35579 1960 aaKnown RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 A0A0A6YYK5 440 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 MAPK13O15264 365 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 CTNND1O60716 968 aaKnown RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 PPP1R37O75864 691 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 P4HBP07237 508 aaKnown RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 ARP10275 920 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 TAL1P17542 331 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 PON1P27169 355 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 TNFRSF8P28908 595 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 OAS2P29728 719 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms