RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 MUC6Q6W4X9 2439 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 WDR19Q8NEZ3 1342 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 SALL3Q9BXA9 1300 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 PI4K2BG5E9Z4 385 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 ATXN7O15265 892 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 NBNO60934 754 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 ATG7O95352 703 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 CXCL10P02778 98 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 MMP3P08254 477 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 SNHG28P0DPA3 235 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 CKBP12277 381 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 SELPP16109 830 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 MX1P20591 662 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 KCNJ6P48051 423 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 ARHGAP1Q07960 439 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 CNKSR3Q6P9H4 555 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 SEPT14Q6ZU15 432 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 CHST3Q7LGC8 479 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 CAGE1Q8TC20 777 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 AFAP1L1Q8TED9 768 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 GDPD5Q8WTR4 605 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 FAM227BQ96M60 508 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 TTC14Q96N46 770 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 MPHOSPH6Q99547 160 aaKnown RBP9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 UBA5Q9GZZ9 404 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 HELLSQ9NRZ9 838 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 PNMA2Q9UL42 364 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 ZMIZ1Q9ULJ6 1067 aa9.41□□□□□ -0.9
CTDSPL2-208ENST00000559793 MYO7AQ13402 2215 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 COL4A4P53420 1690 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 ABHD14A-ACY1A0A1B0GW23 586 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 FAM86C2PA6NEL3 165 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 B4DLN1 442 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 GJB5O95377 273 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 GH1P01241 217 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 GOLGA8HP0CJ92 632 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 HSPD1P10809 573 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 CASTP20810 708 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 MRPL12P52815 198 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 HAND2P61296 217 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 ERVK-21P61565 698 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 ZNF200P98182 395 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 RBL2Q08999 1139 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 USH1GQ495M9 461 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 SAMD5Q5TGI4 173 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 DIEXFQ68CQ4 756 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 LRRC8DQ7L1W4 858 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 SYTL5Q8TDW5 730 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 PBXIP1Q96AQ6 731 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 EVI5LQ96CN4 794 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 RAD9AQ99638 391 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 PHACTR1Q9C0D0 580 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 HDAC6Q9UBN7 1215 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 GTF2IRD1Q9UHL9 959 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 DDX41Q9UJV9 622 aaKnown RBP9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 MTUS1Q9ULD2 1270 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 MYH6P13533 1939 aa9.4□□□□□ -0.9
CTDSPL2-208ENST00000559793 A0A0D9SFI3 127 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 LINC01553A4QN01 128 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 HAS3O00219 553 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 PARNO95453 639 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 FGFR3P22607 806 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 WEE1P30291 646 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 TNP2Q05952 138 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 MBTPS1Q14703 1052 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 STXBP2Q15833 593 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 TRIM71Q2Q1W2 868 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 MCMDC2Q4G0Z9 681 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 ZNF618Q5T7W0 954 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 FAM117BQ6P1L5 589 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 LYPD4Q6UWN0 246 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 FAM178BQ8IXR5 827 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 NSUN6Q8TEA1 469 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 WNT8BQ93098 351 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 TGS1Q96RS0 853 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 IWS1Q96ST2 819 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 ALG1Q9BT22 464 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 SIP14410 1827 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 PIEZO1Q92508 2521 aa9.39□□□□□ -0.91
CTDSPL2-208ENST00000559793 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 MAP2K3P46734 347 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 PDE1AP54750 535 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 CTBSQ01459 385 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 IKBKEQ14164 716 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 DGKDQ16760 1214 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 LEXMQ3ZCV2 418 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 GPATCH4Q5T3I0 446 aaKnown RBP9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 ANKRD45Q5TZF3 282 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 LRRC69Q6ZNQ3 347 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 MFSD6Q6ZSS7 791 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 ZNF589Q86UQ0 364 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 ALDH16A1Q8IZ83 802 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 ADGRF4Q8IZF3 695 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 GJD3Q8N144 294 aa9.38□□□□□ -0.91
CTDSPL2-208ENST00000559793 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms