RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 VN1R2Q8NFZ6 395 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 IGFLR1Q9H665 355 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 TMEM260Q9NX78 707 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 MUTYHQ9UIF7 546 aa12.67□□□□□ -0.38
HERC1-204ENST00000559715 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
HERC1-204ENST00000559715 ZNF292O60281 2723 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 LOC730098B7Z3J9 87 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 C9IYK1 514 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 RPLP2P05387 115 aaKnown RBP12.66□□□□□ -0.38
HERC1-204ENST00000559715 SCG2P13521 617 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 KLRC1P26715 233 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 CDC27P30260 824 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 FAM189BP81408 668 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 NHLH1Q02575 133 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 COASYQ13057 564 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
HERC1-204ENST00000559715 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 PAN2Q504Q3 1202 aaKnown RBP12.66□□□□□ -0.38
HERC1-204ENST00000559715 FAM102BQ5T8I3 360 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 ALYREFQ86V81 257 aaKnown RBP12.66□□□□□ -0.38
HERC1-204ENST00000559715 TEX2Q8IWB9 1127 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 NME8Q8N427 588 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 ATP8B4Q8TF62 1192 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 POF1BQ8WVV4 589 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 TCEANC2Q96MN5 208 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 ANO3Q9BYT9 981 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 FAM50BQ9Y247 325 aa12.66□□□□□ -0.38
HERC1-204ENST00000559715 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
HERC1-204ENST00000559715 DCHS1Q96JQ0 3298 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 CSPG5O95196 566 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 SARSP49591 514 aaKnown RBP12.65□□□□□ -0.38
HERC1-204ENST00000559715 ERVFC1P60507 584 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 KRT76Q01546 638 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 DSC3Q14574 896 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 NIPA1Q7RTP0 329 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 RGS18Q9NS28 235 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 RNF19AQ9NV58 838 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
HERC1-204ENST00000559715 RIF1Q5UIP0 2472 aaKnown RBP12.65□□□□□ -0.38
HERC1-204ENST00000559715 SMCO2A6NFE2 343 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 GPR32O75388 356 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 C22orf31O95567 290 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 FOSP01100 380 aaPredicted RBP12.64□□□□□ -0.39
HERC1-204ENST00000559715 CYP3A4P08684 503 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 SLC26A2P50443 739 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 NAPAP54920 295 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 PAK2Q13177 524 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 LRRC55Q6ZSA7 311 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 BMP8AQ7Z5Y6 402 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 LINC01465Q8N7H1 131 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 SUSD6Q92537 303 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 EDAQ92838 391 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 UIMC1Q96RL1 719 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 KCNH6Q9H252 994 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 AZI2Q9H6S1 392 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 CWH43Q9H720 699 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
HERC1-204ENST00000559715 ST3GAL5Q9UNP4 418 aa12.64□□□□□ -0.39
HERC1-204ENST00000559715 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
HERC1-204ENST00000559715 FSCN2O14926 492 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 HBP1O60381 514 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 STAG3L1P0CL83 205 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 NRIP1P48552 1158 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 PKN1Q16512 942 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 IER5LQ5T953 404 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 RBM23Q86U06 439 aaKnown RBP12.63□□□□□ -0.39
HERC1-204ENST00000559715 FAM228AQ86W67 206 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 LENG9Q96B70 501 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 ADAM2Q99965 735 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 SDF4Q9BRK5 362 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 UPF3BQ9BZI7 483 aaKnown RBP12.63□□□□□ -0.39
HERC1-204ENST00000559715 S1PR5Q9H228 398 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 TYW1Q9NV66 732 aaKnown RBP12.63□□□□□ -0.39
HERC1-204ENST00000559715 USP15Q9Y4E8 981 aaPredicted RBP12.63□□□□□ -0.39
HERC1-204ENST00000559715 COL1A2P08123 1366 aa12.63□□□□□ -0.39
HERC1-204ENST00000559715 PER2O15055 1255 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
HERC1-204ENST00000559715 NDUFV1P49821 464 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 MRE11P49959 708 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 ADCY7P51828 1080 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 NFX1Q12986 1120 aaKnown RBP12.62□□□□□ -0.39
HERC1-204ENST00000559715 AP3B2Q13367 1082 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 RTN1Q16799 776 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 SWSAP1Q6NVH7 229 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 TMEM184AQ6ZMB5 413 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
HERC1-204ENST00000559715 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 DHX32Q7L7V1 743 aaKnown RBP12.62□□□□□ -0.39
HERC1-204ENST00000559715 PHOX2BQ99453 314 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
HERC1-204ENST00000559715 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
HERC1-204ENST00000559715 RBM28Q9NW13 759 aaKnown RBP12.62□□□□□ -0.39
HERC1-204ENST00000559715 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms