RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 SFXN1Q9H9B4 322 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 VAT1LQ9HCJ6 419 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 SPATA6Q9NWH7 488 aaPredicted RBP11.2□□□□□ -0.62
SMAD3-211ENST00000559460 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 PCDHGA2Q9Y5H1 932 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 MYO10Q9HD67 2058 aa11.2□□□□□ -0.62
SMAD3-211ENST00000559460 CEP250Q9BV73 2442 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 CHD8Q9HCK8 2581 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 RRN3P2A6NIE6 340 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 CXCL14O95715 111 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 SRFP11831 508 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 RLBP1P12271 317 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-211ENST00000559460 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-211ENST00000559460 TCF7P36402 384 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-211ENST00000559460 GIT2Q14161 759 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 ZNF528Q3MIS6 628 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 ASPRV1Q53RT3 343 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 SLC24A5Q71RS6 500 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 FCHSD1Q86WN1 690 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 MIER1Q8N108 512 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 LRRC43Q8N309 656 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
SMAD3-211ENST00000559460 IL31RAQ8NI17 732 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 ADAM2Q99965 735 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 BCO2Q9BYV7 579 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
SMAD3-211ENST00000559460 CWH43Q9H720 699 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 KAT14Q9H8E8 782 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 ARHGEF3Q9NR81 526 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 GINS2Q9Y248 185 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 ATRXP46100 2492 aa11.19□□□□□ -0.62
SMAD3-211ENST00000559460 MAP1BP46821 2468 aaKnown RBP11.19□□□□□ -0.62
SMAD3-211ENST00000559460 MBLAC1A4D2B0 266 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-211ENST00000559460 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-211ENST00000559460 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 FGFR1P11362 822 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 KRT76Q01546 638 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 CSTF1Q05048 431 aaKnown RBP11.18□□□□□ -0.62
SMAD3-211ENST00000559460 TRAF1Q13077 416 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 TMEM266Q2M3C6 531 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 PPFIBP1Q86W92 1011 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 PNMA1Q8ND90 353 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 PJA1Q8NG27 643 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 STAMQ92783 540 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 TMEM169Q96HH4 297 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 SHDQ96IW2 340 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 TMEM161AQ9NX61 479 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 FBXO4Q9UKT5 387 aa11.18□□□□□ -0.62
SMAD3-211ENST00000559460 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 SLC30A4O14863 429 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 GPR182O15218 404 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 TBC1D4O60343 1298 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 RPS6KA5O75582 802 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 PBX3P40426 434 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 PTPN14Q15678 1187 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 LETM2Q2VYF4 491 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 KANK3Q6NY19 840 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 DCLRE1AQ6PJP8 1040 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 GPR149Q86SP6 731 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 NLRX1Q86UT6 975 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 GPR152Q8TDT2 470 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 NXPE3Q969Y0 559 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 SMARCAD1Q9H4L7 1026 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 BCAS3Q9H6U6 928 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 RGS18Q9NS28 235 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 RTEL1Q9NZ71 1219 aa11.17□□□□□ -0.62
SMAD3-211ENST00000559460 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-211ENST00000559460 POTEMA6NI47 508 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 SPATA31C2B4DYI2 1134 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 PARP1P09874 1014 aaKnown RBP11.16□□□□□ -0.62
SMAD3-211ENST00000559460 HOXB3P14651 431 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-211ENST00000559460 EPCAMP16422 314 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 ALDH7A1P49419 539 aaKnown RBP11.16□□□□□ -0.62
SMAD3-211ENST00000559460 CCDC178Q5BJE1 867 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 ZMYM1Q5SVZ6 1142 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 MFSD6Q6ZSS7 791 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 IQCA1Q86XH1 822 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 NME8Q8N427 588 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 SEPT1Q8WYJ6 367 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 ESR2Q92731 530 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 INPP4AQ96PE3 977 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-211ENST00000559460 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 EPC1Q9H2F5 836 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 TMX1Q9H3N1 280 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 AZI2Q9H6S1 392 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 ELAC1Q9H777 363 aaKnown RBP11.16□□□□□ -0.62
SMAD3-211ENST00000559460 ZSCAN32Q9NX65 697 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 DLGAP2Q9P1A6 1054 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 OTOGLQ3ZCN5 2332 aa11.16□□□□□ -0.62
SMAD3-211ENST00000559460 KDM3AQ9Y4C1 1321 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 KAT6AQ92794 2004 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 SOBPA7XYQ1 873 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 C9IYK1 514 aa11.15□□□□□ -0.62
SMAD3-211ENST00000559460 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms