RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 ALPK3Q96L96 1907 aa16.55■□□□□ 0.24
SNRPA1-207ENST00000559309 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 A0A1B0GVL5 298 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 TMEM150BA6NC51 233 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 E9PMD0 336 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 ACTN4O43707 911 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 SMIM10L2AP0DMW4 78 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 SMIM10L2BP0DMW5 78 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 NDUFA8P51970 172 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 ITGA7Q13683 1181 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 CCDC73Q6ZRK6 1079 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 SH3RF1Q7Z6J0 888 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 SYT2Q8N9I0 419 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 PIGOQ8TEQ8 1089 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 MTRQ99707 1265 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 CUEDC2Q9H467 287 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 DHX33Q9H6R0 707 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 CYP26B1Q9NR63 512 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 NRBP2Q9NSY0 501 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 KBTBD4Q9NVX7 518 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 CCDC39Q9UFE4 941 aa16.54■□□□□ 0.24
SNRPA1-207ENST00000559309 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 RRN3P2A6NIE6 340 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 ARVCFO00192 962 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 PRPF40AO75400 957 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 MAFO75444 373 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 C22orf31O95567 290 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 MARK3P27448 753 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 MCM4P33991 863 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 TXLNAP40222 546 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 CNNM4Q6P4Q7 775 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 OTUD6AQ7L8S5 288 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 ANKRD33Q7Z3H0 272 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 FSIP1Q8NA03 581 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 LMBR1Q8WVP7 490 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 RAD54LQ92698 747 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 PYM1Q9BRP8 204 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 STARD7Q9NQZ5 370 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 FAM13BQ9NYF5 915 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
SNRPA1-207ENST00000559309 KAT6AQ92794 2004 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 CD4P01730 458 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 LIG1P18858 919 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 NPEPPSP55786 919 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 FAM160A1Q05DH4 1040 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 GRIK4Q16099 956 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 ARSHQ5FYA8 562 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 RRAGBQ5VZM2 374 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 PLA2G4FQ68DD2 849 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 SLC39A5Q6ZMH5 540 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 C1orf186Q6ZWK4 172 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 RPAINQ86UA6 219 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 ELOA2Q8IYF1 753 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 LARP4BQ92615 738 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 TIGD1Q96MW7 591 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 TOX2Q96NM4 488 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 C11orf49Q9H6J7 331 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 XPNPEP1Q9NQW7 623 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
SNRPA1-207ENST00000559309 TRIOBPQ9H2D6 2365 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 A0A087WWV3 80 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 POLR2DO15514 142 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 SLFN14P0C7P3 912 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 PLA2G4BP0C869 781 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 RBL2Q08999 1139 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 PPFIA1Q13136 1202 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 LONRF3Q496Y0 759 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 GDF6Q6KF10 455 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 RINT1Q6NUQ1 792 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 NECAB2Q7Z6G3 386 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 FAM126BQ8IXS8 530 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 IQUBQ8NA54 791 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 BHMT2Q9H2M3 363 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 SEPT9Q9UHD8 586 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-207ENST00000559309 DGAT1O75907 488 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 ZNF202O95125 648 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 CYP11B2P19099 503 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 GUCY2CP25092 1073 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 RFC5P40937 340 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 SYKP43405 635 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 MDM2Q00987 491 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 TRIM71Q2Q1W2 868 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 PDILTQ8N807 584 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 C7orf31Q8N865 590 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 TRAPPC12Q8WVT3 735 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 CEP170P1Q96L14 293 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 PLIN2Q99541 437 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 PANK2Q9BZ23 570 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms