RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 HMGCRP04035 888 aa8.81□□□□□ -1
SPG11-213ENST00000558988 GLDCP23378 1020 aa8.81□□□□□ -1
SPG11-213ENST00000558988 SHMT1P34896 483 aa8.81□□□□□ -1
SPG11-213ENST00000558988 NFKB2Q00653 900 aa8.81□□□□□ -1
SPG11-213ENST00000558988 ATP2B2Q01814 1243 aa8.81□□□□□ -1
SPG11-213ENST00000558988 HABP4Q5JVS0 413 aaKnown RBP8.81□□□□□ -1
SPG11-213ENST00000558988 TATDN1Q6P1N9 297 aa8.81□□□□□ -1
SPG11-213ENST00000558988 METTL16Q86W50 562 aaKnown RBP8.81□□□□□ -1
SPG11-213ENST00000558988 YTHDC1Q96MU7 727 aaKnown RBP8.81□□□□□ -1
SPG11-213ENST00000558988 TRIM56Q9BRZ2 755 aaKnown RBP8.81□□□□□ -1
SPG11-213ENST00000558988 TANGO6Q9C0B7 1094 aa8.81□□□□□ -1
SPG11-213ENST00000558988 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.81□□□□□ -13e-6■□□□□ 8.9
SPG11-213ENST00000558988 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.81□□□□□ -1
SPG11-213ENST00000558988 EHD4Q9H223 541 aa8.81□□□□□ -1
SPG11-213ENST00000558988 PORCNQ9H237 461 aa8.81□□□□□ -1
SPG11-213ENST00000558988 TNRC18O15417 2968 aaPredicted RBP8.8□□□□□ -1
SPG11-213ENST00000558988 TCRBV5S4A2TA0A5A2 114 aa8.8□□□□□ -1
SPG11-213ENST00000558988 SMIM22K7EJ46 135 aa8.8□□□□□ -1
SPG11-213ENST00000558988 IGSF3O75054 1194 aa8.8□□□□□ -1
SPG11-213ENST00000558988 SGPL1O95470 568 aa8.8□□□□□ -1
SPG11-213ENST00000558988 RPLP1P05386 114 aaKnown RBP8.8□□□□□ -1
SPG11-213ENST00000558988 EDN3P14138 238 aa8.8□□□□□ -1
SPG11-213ENST00000558988 ZKSCAN1P17029 563 aaPredicted RBP8.8□□□□□ -1
SPG11-213ENST00000558988 ATP5JP18859 108 aa8.8□□□□□ -1
SPG11-213ENST00000558988 VCAM1P19320 739 aa8.8□□□□□ -1
SPG11-213ENST00000558988 ADD2P35612 726 aa8.8□□□□□ -1
SPG11-213ENST00000558988 ERVK-24P63145 666 aa8.8□□□□□ -1
SPG11-213ENST00000558988 AMOTL1Q8IY63 956 aa8.8□□□□□ -1
SPG11-213ENST00000558988 SPICE1Q8N0Z3 855 aa8.8□□□□□ -1
SPG11-213ENST00000558988 DIS3LQ8TF46 1054 aaKnown RBP8.8□□□□□ -1
SPG11-213ENST00000558988 TRIB2Q92519 343 aa8.8□□□□□ -1
SPG11-213ENST00000558988 HAUS7Q99871 368 aa8.8□□□□□ -1
SPG11-213ENST00000558988 HTATIP2Q9BUP3 242 aa8.8□□□□□ -1
SPG11-213ENST00000558988 EPB41L4BQ9H329 900 aa8.8□□□□□ -1
SPG11-213ENST00000558988 RPAP3Q9H6T3 665 aaPredicted RBP8.8□□□□□ -1
SPG11-213ENST00000558988 LATS2Q9NRM7 1088 aa8.8□□□□□ -1
SPG11-213ENST00000558988 GINM1Q9NU53 330 aa8.8□□□□□ -1
SPG11-213ENST00000558988 C19orf73Q9NVV2 129 aa8.8□□□□□ -1
SPG11-213ENST00000558988 RBPJLQ9UBG7 517 aa8.8□□□□□ -1
SPG11-213ENST00000558988 SLC4A4Q9Y6R1 1079 aa8.8□□□□□ -1
SPG11-213ENST00000558988 BAZ2AQ9UIF9 1905 aaKnown RBP8.8□□□□□ -1
SPG11-213ENST00000558988 DDX60LQ5H9U9 1706 aaKnown RBP8.8□□□□□ -1
SPG11-213ENST00000558988 AKR1B1P15121 316 aa8.79□□□□□ -1
SPG11-213ENST00000558988 MAPK4P31152 587 aa8.79□□□□□ -1
SPG11-213ENST00000558988 HOXA7P31268 230 aaPredicted RBP8.79□□□□□ -1
SPG11-213ENST00000558988 PLS1Q14651 629 aa8.79□□□□□ -1
SPG11-213ENST00000558988 CCL14Q16627 93 aa8.79□□□□□ -1
SPG11-213ENST00000558988 GPR142Q7Z601 462 aa8.79□□□□□ -1
SPG11-213ENST00000558988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.79□□□□□ -1
SPG11-213ENST00000558988 GPATCH3Q96I76 525 aa8.79□□□□□ -1
SPG11-213ENST00000558988 PIDD1Q9HB75 910 aa8.79□□□□□ -1
SPG11-213ENST00000558988 MORF4L1Q9UBU8 362 aa8.79□□□□□ -1
SPG11-213ENST00000558988 GJD2Q9UKL4 321 aa8.79□□□□□ -1
SPG11-213ENST00000558988 MYH8P13535 1937 aa8.78□□□□□ -1
SPG11-213ENST00000558988 A0A1W2PRG0 241 aa8.78□□□□□ -1
SPG11-213ENST00000558988 TMPRSS2O15393 492 aa8.78□□□□□ -1
SPG11-213ENST00000558988 GUCY1A2P33402 732 aa8.78□□□□□ -1
SPG11-213ENST00000558988 USP14P54578 494 aa8.78□□□□□ -1
SPG11-213ENST00000558988 CCNA1P78396 465 aa8.78□□□□□ -1
SPG11-213ENST00000558988 ICA1Q05084 483 aa8.78□□□□□ -1
SPG11-213ENST00000558988 C8orf34Q49A92 452 aa8.78□□□□□ -1
SPG11-213ENST00000558988 PEAR1Q5VY43 1037 aaPredicted RBP8.78□□□□□ -1
SPG11-213ENST00000558988 CATSPERGQ6ZRH7 1159 aa8.78□□□□□ -1
SPG11-213ENST00000558988 PLEKHH3Q7Z736 793 aa8.78□□□□□ -1
SPG11-213ENST00000558988 SMYD4Q8IYR2 804 aaPredicted RBP8.78□□□□□ -1
SPG11-213ENST00000558988 C7orf61Q8IZ16 206 aa8.78□□□□□ -1
SPG11-213ENST00000558988 GTF3C2Q8WUA4 911 aaPredicted RBP8.78□□□□□ -1
SPG11-213ENST00000558988 SOCS4Q8WXH5 440 aa8.78□□□□□ -1
SPG11-213ENST00000558988 EDEM1Q92611 657 aa8.78□□□□□ -1
SPG11-213ENST00000558988 PAWRQ96IZ0 340 aaKnown RBP8.78□□□□□ -1
SPG11-213ENST00000558988 HEXIM2Q96MH2 286 aaKnown RBP8.78□□□□□ -1
SPG11-213ENST00000558988 KIAA1683Q9H0B3 1180 aa8.78□□□□□ -1
SPG11-213ENST00000558988 CLEC4MQ9H2X3 399 aaPredicted RBP8.78□□□□□ -1
SPG11-213ENST00000558988 ECHDC1Q9NTX5 307 aa8.78□□□□□ -1
SPG11-213ENST00000558988 IVNS1ABPQ9Y6Y0 642 aa8.78□□□□□ -1
SPG11-213ENST00000558988 MYH7P12883 1935 aa8.78□□□□□ -1
SPG11-213ENST00000558988 RPTORQ8N122 1335 aa8.78□□□□□ -1
SPG11-213ENST00000558988 PLXNB2O15031 1838 aa8.77□□□□□ -1
SPG11-213ENST00000558988 MINDY4BA8MYZ0 360 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 CNMDO75829 334 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 APPP05067 770 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 CNGA1P29973 690 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 RGS2P41220 211 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 GABPAQ06546 454 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 SKOR2Q2VWA4 1001 aaPredicted RBP8.77□□□□□ -1.01
SPG11-213ENST00000558988 ZSCAN25Q6NSZ9 544 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 TMED8Q6PL24 325 aaPredicted RBP8.77□□□□□ -1.01
SPG11-213ENST00000558988 TMEM179Q6ZVK1 233 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 KCNN1Q92952 543 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 C12orf42Q96LP6 360 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 APBA2Q99767 749 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 PUS7LQ9H0K6 701 aaKnown RBP8.77□□□□□ -1.01
SPG11-213ENST00000558988 BTBD7Q9P203 1132 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 HTTP42858 3142 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 SYNGAP1Q96PV0 1343 aa8.77□□□□□ -1.01
SPG11-213ENST00000558988 FLOT1O75955 427 aa8.76□□□□□ -1.01
SPG11-213ENST00000558988 GLRX3O76003 335 aaKnown RBP8.76□□□□□ -1.01
SPG11-213ENST00000558988 CCND3P30281 292 aaPredicted RBP8.76□□□□□ -1.01
SPG11-213ENST00000558988 TDO2P48775 406 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms