RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 C17orf80Q9BSJ5 609 aa19.25■□□□□ 0.67
LRRC28-210ENST00000558879 CELF4Q9BZC1 486 aaKnown RBP19.25■□□□□ 0.67
LRRC28-210ENST00000558879 ZNF862O60290 1169 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 PSMD10O75832 226 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 UPP2O95045 317 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 LINC00271P0C7V0 271 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 TMEM62Q0P6H9 643 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 LRCH2Q5VUJ6 765 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 CRIPAKQ8N1N5 446 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 ETNPPLQ8TBG4 499 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 SAMD11Q96NU1 681 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 TEKT3Q9BXF9 490 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 GABBR1Q9UBS5 961 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 MTUS1Q9ULD2 1270 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 KCNJ14Q9UNX9 436 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 MYO7AQ13402 2215 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 XIRP2A4UGR9 3374 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 ADGRA3Q8IWK6 1321 aa19.24■□□□□ 0.67
LRRC28-210ENST00000558879 ENPP3O14638 875 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 GAS7O60861 476 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 LARGE1O95461 756 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 SFNP31947 248 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 JAK3P52333 1124 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 NONOQ15233 471 aaKnown RBP eCLIP19.23■□□□□ 0.67
LRRC28-210ENST00000558879 UGCGQ16739 394 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 KRT25Q7Z3Z0 450 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 KIAA0319LQ8IZA0 1049 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 LINC01465Q8N7H1 131 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 FBXO22Q8NEZ5 403 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 SYMPKQ92797 1274 aaKnown RBP19.23■□□□□ 0.67
LRRC28-210ENST00000558879 ZNF689Q96CS4 500 aaPredicted RBP19.23■□□□□ 0.67
LRRC28-210ENST00000558879 FAM167AQ96KS9 214 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 FTHL17Q9BXU8 183 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 UNC45AQ9H3U1 944 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 DISC1Q9NRI5 854 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 CEP131Q9UPN4 1083 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 SAMM50Q9Y512 469 aa19.23■□□□□ 0.67
LRRC28-210ENST00000558879 MUC3AQ02505 3323 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 EIF5BO60841 1220 aaKnown RBP19.22■□□□□ 0.67
LRRC28-210ENST00000558879 PRKCEQ02156 737 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 EPC2Q52LR7 807 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 CKAP2LQ8IYA6 745 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 RDM1Q8NG50 284 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 TMEM40Q8WWA1 233 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 GTF3C6Q969F1 213 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 GJA10Q969M2 543 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 ASB2Q96Q27 587 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 TSPYL2Q9H2G4 693 aaPredicted RBP19.22■□□□□ 0.67
LRRC28-210ENST00000558879 PADI3Q9ULW8 664 aa19.22■□□□□ 0.67
LRRC28-210ENST00000558879 SEC24BO95487 1268 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 OATP04181 439 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
LRRC28-210ENST00000558879 MRPS5P82675 430 aaKnown RBP19.21■□□□□ 0.67
LRRC28-210ENST00000558879 PAK2Q13177 524 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 ME3Q16798 604 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 INF2Q27J81 1249 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 FAM43BQ6ZT52 329 aaPredicted RBP19.21■□□□□ 0.67
LRRC28-210ENST00000558879 RTN4RL1Q86UN2 441 aaPredicted RBP19.21■□□□□ 0.67
LRRC28-210ENST00000558879 TMX1Q9H3N1 280 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 ERVK-5Q9HDB9 667 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 GJB4Q9NTQ9 266 aa19.21■□□□□ 0.67
LRRC28-210ENST00000558879 CHMP2AO43633 222 aa19.2■□□□□ 0.66
LRRC28-210ENST00000558879 SLC37A4O43826 429 aa19.2■□□□□ 0.66
LRRC28-210ENST00000558879 DTNBO60941 627 aa19.2■□□□□ 0.66
LRRC28-210ENST00000558879 XBP1P17861 261 aa19.2■□□□□ 0.66
LRRC28-210ENST00000558879 CDHR5Q9HBB8 845 aa19.2■□□□□ 0.66
LRRC28-210ENST00000558879 ORC3Q9UBD5 711 aaPredicted RBP19.2■□□□□ 0.66
LRRC28-210ENST00000558879 C5orf67F2Z3F1 127 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 H3BNC9 293 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 MAGEB2O15479 319 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 GPR32O75388 356 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 DGKIO75912 1065 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 ST3GAL1Q11201 340 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 NEK8Q86SG6 692 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 NPAS4Q8IUM7 802 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 TMEM192Q8IY95 271 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 NSUN7Q8NE18 718 aaKnown RBP19.19■□□□□ 0.66
LRRC28-210ENST00000558879 OXER1Q8TDS5 423 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 CLP1Q92989 425 aaKnown RBP19.19■□□□□ 0.66
LRRC28-210ENST00000558879 KCNMB3Q9NPA1 279 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 DDX25Q9UHL0 483 aaKnown RBP19.19■□□□□ 0.66
LRRC28-210ENST00000558879 COG5Q9UP83 839 aa19.19■□□□□ 0.66
LRRC28-210ENST00000558879 NOC2LQ9Y3T9 749 aaKnown RBP19.19■□□□□ 0.66
LRRC28-210ENST00000558879 CCDC194A0A1B0GVG4 234 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 MGEA5O60502 916 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 STBD1O95210 358 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 VTNP04004 478 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 GCFC2P16383 781 aaKnown RBP19.18■□□□□ 0.66
LRRC28-210ENST00000558879 CLCN3P51790 818 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 TFF2Q03403 129 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 TARBP2Q15633 366 aaKnown RBP19.18■□□□□ 0.66
LRRC28-210ENST00000558879 TMEM266Q2M3C6 531 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 PPP4R3AQ6IN85 833 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 MIER3Q7Z3K6 550 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 FIBCD1Q8N539 461 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 NECAB1Q8N987 351 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 WASF1Q92558 559 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 TNFRSF25Q93038 417 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 CEP89Q96ST8 783 aa19.18■□□□□ 0.66
LRRC28-210ENST00000558879 RPS6KA5O75582 802 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms