RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TOP1MTQ969P6 601 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 DDX25Q9UHL0 483 aaKnown RBP14.14□□□□□ -0.15
SMAD3-208ENST00000558827 INSL6Q9Y581 213 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 MAFBQ9Y5Q3 323 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-208ENST00000558827 MTCH2Q9Y6C9 303 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 MYO7AQ13402 2215 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 WDR81Q562E7 1941 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 SMIM35A0A1B0GVV1 85 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 GTPBP6O43824 516 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-208ENST00000558827 CSPG5O95196 566 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 XBP1P17861 261 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 SLC26A2P50443 739 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 KIZQ2M2Z5 673 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 C8orf34Q49A92 452 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 Q4G0T1 1027 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 TSHZ1Q6ZSZ6 1077 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 CCDC83Q8IWF9 413 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 SMAP1Q8IYB5 467 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-208ENST00000558827 LINC01599Q8WXQ3 324 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 TGS1Q96RS0 853 aaKnown RBP14.13□□□□□ -0.15
SMAD3-208ENST00000558827 COL25A1Q9BXS0 654 aaPredicted RBP14.13□□□□□ -0.15
SMAD3-208ENST00000558827 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 SUGCTQ9HAC7 445 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 PADI3Q9ULW8 664 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 NOC2LQ9Y3T9 749 aaKnown RBP14.13□□□□□ -0.15
SMAD3-208ENST00000558827 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
SMAD3-208ENST00000558827 CYP3A7-CYP3A51PA0A087WV96 503 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 EML1O00423 815 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 MARCH6O60337 910 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 CCNT1O60563 726 aaKnown RBP14.12□□□□□ -0.15
SMAD3-208ENST00000558827 LPXNO60711 386 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 PSMD10O75832 226 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 C22orf31O95567 290 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 ATP2B1P20020 1258 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 CYP3A7P24462 503 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 ERVK-21P61565 698 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 HTRA4P83105 476 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-208ENST00000558827 PRKCEQ02156 737 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 PAK2Q13177 524 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 EFCAB12Q6NXP0 572 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 BANK1Q8NDB2 785 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 TMEM40Q8WWA1 233 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-208ENST00000558827 APBB2Q92870 758 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 RIT2Q99578 217 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 OSMRQ99650 979 aa14.12□□□□□ -0.15
SMAD3-208ENST00000558827 DDX11L8A8MPP1 907 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 TRANK1O15050 2925 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 OATP04181 439 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 KRT2P35908 639 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 GATMP50440 423 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 TFF2Q03403 129 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 MTERF2Q49AM1 385 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 PAN2Q504Q3 1202 aaKnown RBP14.11□□□□□ -0.15
SMAD3-208ENST00000558827 NEK8Q86SG6 692 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 FBXO22Q8NEZ5 403 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 ETNPPLQ8TBG4 499 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 WASF1Q92558 559 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 TMX1Q9H3N1 280 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 NRBP2Q9NSY0 501 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 SEPT9Q9UHD8 586 aaPredicted RBP14.11□□□□□ -0.15
SMAD3-208ENST00000558827 AKT3Q9Y243 479 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 IGSF9BQ9UPX0 1349 aa14.11□□□□□ -0.15
SMAD3-208ENST00000558827 COL1A2P08123 1366 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 BTBD18B2RXH4 712 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 WNT7AO00755 349 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 MGEA5O60502 916 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 RPS6KA5O75582 802 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 FGFR4P22455 802 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 JAK3P52333 1124 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 DRP2Q13474 957 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 PLA2G4FQ68DD2 849 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 NME8Q8N427 588 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 IL17RAQ96F46 866 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 MBOAT7Q96N66 472 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 ST3GAL5Q9UNP4 418 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 LIMCH1Q9UPQ0 1083 aa14.1□□□□□ -0.15
SMAD3-208ENST00000558827 TCF20Q9UGU0 1960 aaKnown RBP14.1□□□□□ -0.15
SMAD3-208ENST00000558827 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 TTC3P53804 2025 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 CSDE1O75534 798 aaKnown RBP14.09□□□□□ -0.15
SMAD3-208ENST00000558827 SFNP31947 248 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 NLRP11P59045 1033 aaKnown RBP14.09□□□□□ -0.15
SMAD3-208ENST00000558827 EPC2Q52LR7 807 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 NCAPH2Q6IBW4 605 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 TMEM192Q8IY95 271 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 DIS3L2Q8IYB7 885 aaKnown RBP14.09□□□□□ -0.15
SMAD3-208ENST00000558827 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-208ENST00000558827 FAM167AQ96KS9 214 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 KIF2CQ99661 725 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 ERVK-5Q9HDB9 667 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-208ENST00000558827 THEGQ9P2T0 379 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 COL4A4P53420 1690 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-208ENST00000558827 REV3LO60673 3130 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 BRWD1Q9NSI6 2320 aa14.09□□□□□ -0.15
SMAD3-208ENST00000558827 A0A087WWV3 80 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms