RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 CCT2P78371 535 aaKnown RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 MCTP2Q6DN12 878 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 KIAA0319LQ8IZA0 1049 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 RASGRP4Q8TDF6 673 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 CCDC12Q8WUD4 166 aaPredicted RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 LINC01599Q8WXQ3 324 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 ZNF689Q96CS4 500 aaPredicted RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 RNF26Q9BY78 433 aaPredicted RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 CELF4Q9BZC1 486 aaKnown RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
CASC4-205ENST00000558735 PADI3Q9ULW8 664 aa13.09□□□□□ -0.31
CASC4-205ENST00000558735 NID2Q14112 1375 aa13.08□□□□□ -0.31
CASC4-205ENST00000558735 ZBTB42B2RXF5 422 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 BACH1O14867 736 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 DGKIO75912 1065 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 BMPR1AP36894 532 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
CASC4-205ENST00000558735 TOB2Q14106 344 aaPredicted RBP13.08□□□□□ -0.32
CASC4-205ENST00000558735 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 REXO1Q8N1G1 1221 aaKnown RBP13.08□□□□□ -0.32
CASC4-205ENST00000558735 FIBCD1Q8N539 461 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 EDAQ92838 391 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 PRRX2Q99811 253 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
CASC4-205ENST00000558735 ZNF577Q9BSK1 485 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 RC3H2Q9HBD1 1191 aaKnown RBP13.08□□□□□ -0.32
CASC4-205ENST00000558735 ZNF302Q9NR11 478 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 CLDND1Q9NY35 253 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 MAFBQ9Y5Q3 323 aaPredicted RBP13.08□□□□□ -0.32
CASC4-205ENST00000558735 TRPV2Q9Y5S1 764 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 KDM3AQ9Y4C1 1321 aa13.08□□□□□ -0.32
CASC4-205ENST00000558735 MBTPS2O43462 519 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 EPB41L2O43491 1005 aaKnown RBP13.07□□□□□ -0.32
CASC4-205ENST00000558735 KRT76Q01546 638 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 HYAL1Q12794 435 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 SMAD4Q13485 552 aaKnown RBP13.07□□□□□ -0.32
CASC4-205ENST00000558735 PRR16Q569H4 304 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 ZNF484Q5JVG2 852 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 MIS18BP1Q6P0N0 1132 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 CLP1Q92989 425 aaKnown RBP13.07□□□□□ -0.32
CASC4-205ENST00000558735 LENG9Q96B70 501 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 C11orf84Q9BUA3 381 aaPredicted RBP13.07□□□□□ -0.32
CASC4-205ENST00000558735 TMX1Q9H3N1 280 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 RWDD3Q9Y3V2 267 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 IGSF9BQ9UPX0 1349 aa13.07□□□□□ -0.32
CASC4-205ENST00000558735 TTC3P53804 2025 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 RALGAPA2Q2PPJ7 1873 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 M0QZ92 97 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 USP11P51784 963 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 ZNF746Q6NUN9 644 aaPredicted RBP13.06□□□□□ -0.32
CASC4-205ENST00000558735 TRMT1LQ7Z2T5 733 aaKnown RBP13.06□□□□□ -0.32
CASC4-205ENST00000558735 RNF135Q8IUD6 432 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 MUTYHQ9UIF7 546 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 NOC2LQ9Y3T9 749 aaKnown RBP13.06□□□□□ -0.32
CASC4-205ENST00000558735 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
CASC4-205ENST00000558735 TECTAO75443 2155 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 MYO7AQ13402 2215 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 GRM6O15303 877 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 ST18O60284 1047 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 EYA4O95677 639 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 PTPN5P54829 565 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 NLRP5P59047 1200 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 SETQ01105 290 aaPredicted RBP13.05□□□□□ -0.32
CASC4-205ENST00000558735 DLX2Q07687 328 aaPredicted RBP13.05□□□□□ -0.32
CASC4-205ENST00000558735 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
CASC4-205ENST00000558735 PAK2Q13177 524 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 ADAM15Q13444 863 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 BTG3Q14201 252 aaPredicted RBP13.05□□□□□ -0.32
CASC4-205ENST00000558735 PRSS33Q8NF86 280 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
CASC4-205ENST00000558735 ZNF274Q96GC6 653 aaPredicted RBP13.05□□□□□ -0.32
CASC4-205ENST00000558735 PLVAPQ9BX97 442 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 GABBR1Q9UBS5 961 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 CYP46A1Q9Y6A2 500 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 COL1A2P08123 1366 aa13.05□□□□□ -0.32
CASC4-205ENST00000558735 MSH4O15457 936 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 MGEA5O60502 916 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 C22orf31O95567 290 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 PSAPP07602 524 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 CTNNB1P35222 781 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
CASC4-205ENST00000558735 CAMK1Q14012 370 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 CBX2Q14781 532 aaPredicted RBP13.04□□□□□ -0.32
CASC4-205ENST00000558735 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms