RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TRAF7Q6Q0C0 670 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 SH2D3CQ8N5H7 860 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 CCT7Q99832 543 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 CCDC90BQ9GZT6 254 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 SUN2Q9UH99 717 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 NPATQ14207 1427 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 ESYT3A0FGR9 886 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 CHEK2O96017 543 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 SPOPLQ6IQ16 392 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 CDR2LQ86X02 465 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 DTX3LQ8TDB6 740 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 TUBGCP3Q96CW5 907 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 MTBPQ96DY7 904 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 LRRC1Q9BTT6 524 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 ROPN1BQ9BZX4 212 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 USP44Q9H0E7 712 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 ROPN1Q9HAT0 212 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 TUBA8Q9NY65 449 aaPredicted RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 CA8P35219 290 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 BLVRAP53004 296 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 DSG1Q02413 1049 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 MIEF2Q96C03 454 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 FAM192AQ9GZU8 254 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 SMYD2Q9NRG4 433 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 ARPP21Q9UBL0 812 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 TEKT2Q9UIF3 430 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 SAT1P21673 171 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 IL13P35225 146 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 NUP107P57740 925 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 SCYL2Q6P3W7 929 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 DEPDC1BQ8WUY9 529 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 EAF2Q96CJ1 260 aaPredicted RBP12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 GTPBP10A4D1E9 387 aaKnown RBP12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 RSPH10B2B2RC85 870 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 E2F6O75461 281 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 PRDM1O75626 825 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 RSPH10BP0C881 870 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 PAX7P23759 505 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 MMGT1Q8N4V1 131 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 ALKBH8Q96BT7 664 aaKnown RBP12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 TNRQ92752 1358 aa12.58□□□□□ -0.4
CSPG4P12-201ENST00000558282 TJP3O95049 919 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 FGAP02671 866 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 UBTFL6P0CB48 400 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 DDIT3P35638 169 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 SCTRP47872 440 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 GCKRQ14397 625 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 LRRC14Q15048 493 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 MYCBPAPQ8TBZ2 947 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 SMCR8Q8TEV9 937 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 MMS19Q96T76 1030 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 DCLRE1BQ9H816 532 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 ZDHHC9Q9Y397 364 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 GFPT2O94808 682 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 CYP21A2P08686 494 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 IFNAR1P17181 557 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 ZAP70P43403 619 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 PROM2Q8N271 834 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 SH3GL1Q99961 368 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 HDAC6Q9UBN7 1215 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 ZMYND8Q9ULU4 1186 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 MTO1Q9Y2Z2 717 aaKnown RBP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 A6NJR5 290 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 AHCYL1O43865 530 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 CDH16O75309 829 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 IDI1Q13907 227 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 ARMCX6Q7L4S7 300 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 PACS2Q86VP3 889 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 GRAMD1CQ8IYS0 662 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 POMGNT1Q8WZA1 660 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 ERP27Q96DN0 273 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 GCNT4Q9P109 453 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 MBD5Q9P267 1494 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 DYTNA2CJ06 578 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 H3BRJ5 948 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 TAC1P20366 129 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 TFAP4Q01664 338 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 TRIP10Q15642 601 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 SYDE1Q6ZW31 735 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 TRIM59Q8IWR1 403 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 RBM41Q96IZ5 413 aaKnown RBP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 TNKSO95271 1327 aa12.57□□□□□ -0.4
CSPG4P12-201ENST00000558282 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 PSMD14O00487 310 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 PTPREP23469 700 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 AARSP49588 968 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 TRIP13Q15645 432 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 TAF1BQ53T94 588 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 DDX47Q9H0S4 455 aaKnown RBP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 LPXNO60711 386 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 GRIN1Q05586 938 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 EFTUD2Q15029 972 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 TBCCQ15814 346 aa12.56□□□□□ -0.4
CSPG4P12-201ENST00000558282 HP1BP3Q5SSJ5 553 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms