RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RASGRP4Q8TDF6 673 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 CUL5Q93034 780 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 CDHR1Q96JP9 859 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 CELF4Q9BZC1 486 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 SEMA4AQ9H3S1 761 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 RIOX1Q9H6W3 641 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 CNNM2Q9H8M5 875 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 NGRNQ9NPE2 291 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 TSHZ2Q9NRE2 1034 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 C1orf112Q9NSG2 853 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 LZTS1Q9Y250 596 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 SUPT16HQ9Y5B9 1047 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 PCDHGC5Q9Y5F6 944 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 TRPV2Q9Y5S1 764 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 BAZ2BQ9UIF8 2168 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 ZFHX2Q9C0A1 2572 aaPredicted RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 NEDD4P46934 1319 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 LOXHD1Q8IVV2 1947 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 GSTTP1A0A1W2PQM5 241 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 TBKBP1A7MCY6 615 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 FSCN2O14926 492 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 MAFGO15525 162 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 PPP1R11O60927 126 aaPredicted RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 BRD1O95696 1058 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 INSRRP14616 1297 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 LAG3P18627 525 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 IBSPP21815 317 aaPredicted RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 SP100P23497 879 aaPredicted RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 MARK3P27448 753 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 MTHFRP42898 656 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 PDE1AP54750 535 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 IGBP1P78318 339 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 RBM10P98175 930 aaKnown RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 KRT76Q01546 638 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 PLCB3Q01970 1234 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 NFX1Q12986 1120 aaKnown RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 SEMA3FQ13275 785 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 KCNC3Q14003 757 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 DSG2Q14126 1118 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 IMMTQ16891 758 aaKnown RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 ATAT1Q5SQI0 421 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 MARCH8Q5T0T0 291 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 PLPP4Q5VZY2 271 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 PCNX4Q63HM2 1172 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 LLGL2Q6P1M3 1020 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 SYCE2Q6PIF2 218 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 SLC24A5Q71RS6 500 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 ZNF589Q86UQ0 364 aaPredicted RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 HOMER1Q86YM7 354 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 ZDHHC14Q8IZN3 488 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 COLGALT1Q8NBJ5 622 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 VN1R2Q8NFZ6 395 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 SMARCC2Q8TAQ2 1214 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 KCNG4Q8TDN1 519 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 LINC01599Q8WXQ3 324 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 MRPS27Q92552 414 aaKnown RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 CASP10Q92851 521 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 RILPL2Q969X0 211 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 PIGSQ96S52 555 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 APOL5Q9BWW9 433 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 FAM49AQ9H0Q0 323 aaPredicted RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 ADAM7Q9H2U9 754 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 AZI2Q9H6S1 392 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 ATP6V0A4Q9HBG4 840 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 ENTPD7Q9NQZ7 604 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 TYW1Q9NV66 732 aaKnown RBP5.96□□□□□ -1.46
SPG11-208ENST00000558155 LIMD1Q9UGP4 676 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 MAD2L2Q9UI95 211 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 PCDHA2Q9Y5H9 948 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 DOCK5Q9H7D0 1870 aa5.96□□□□□ -1.46
SPG11-208ENST00000558155 SMIM35A0A1B0GVV1 85 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 DENND3A2RUS2 1198 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 C2CD4DB7Z1M9 353 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 GPR182O15218 404 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 RPS6KA5O75582 802 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 GATMP50440 423 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 TMEM62Q0P6H9 643 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 PUM1Q14671 1186 aaKnown RBP eCLIP5.95□□□□□ -1.46
SPG11-208ENST00000558155 FAM102BQ5T8I3 360 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 DGLUCYQ7Z3D6 616 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 TMC7Q7Z402 723 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 TMEM87AQ8NBN3 555 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 FLCNQ8NFG4 579 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 GPRASP2Q96D09 838 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 ADAM2Q99965 735 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 TCF25Q9BQ70 676 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 RTP3Q9BQQ7 232 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 TMX1Q9H3N1 280 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 PLXNA4Q9HCM2 1894 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 RGS18Q9NS28 235 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 TELO2Q9Y4R8 837 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 FRMPD4Q14CM0 1322 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 IGSF9BQ9UPX0 1349 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 KDM3AQ9Y4C1 1321 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 KIAA1671Q9BY89 1806 aa5.95□□□□□ -1.46
SPG11-208ENST00000558155 FNDC1Q4ZHG4 1894 aaPredicted RBP5.94□□□□□ -1.46
SPG11-208ENST00000558155 ERICH2A1L162 156 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 HIDE1A8MVS5 230 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 C9IYK1 514 aa5.94□□□□□ -1.46
SPG11-208ENST00000558155 BHMG1C9JSJ3 638 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms